Institute for Biodiversity and Ecosystem Dynamics

Photographer: Jan van Arkel

Mr T. (Tom) Berben MSc

PhD Candidate
  • Faculty of Science
    Institute for Biodiversity and Ecosystem Dynamics
  • Visiting address
    Science Park A
    Science Park 904  
  • Postal address:
    Postbus  94248
    1090 GE  Amsterdam
  • T.Berben@uva.nl
    T: 0205257895

2017

2016

  • Salman, V., Berben, T., Bowers, R. M., Woyke, T., Teske, A., & Angert, E. R. (2016). Insights into the single cell draft genome of "Candidatus Achromatium palustre". Standards in Genomic Sciences, 11, [28]. DOI: 10.1186/s40793-016-0146-x  [details] 

2015

  • Berben, T., Sorokin, D. Y., Ivanova, N., Pati, A., Kyrpides, N., Goodwin, L. A., ... Muyzer, G. (2015). Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1T, an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake. Standards in Genomic Sciences, 10, [105]. DOI: 10.1186/s40793-015-0097-7  [details] 
  • Berben, T., Sorokin, D. Y., Ivanova, N., Pati, A., Kyrpides, N., Goodwin, L. A., ... Muyzer, G. (2015). Partial genome sequence of Thioalkalivibrio thiocyanodenitrificans ARhD 1T, a chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium capable of complete denitrification. Standards in Genomic Sciences, 10, [84]. DOI: 10.1186/s40793-015-0080-3  [details] 
  • Berben, T., Sorokin, D. Y., Ivanova, N., Pati, A., Kyrpides, N., Goodwin, L. A., ... Muyzer, G. (2015). Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2T. Standards in Genomic Sciences, 10, [85]. DOI: 10.1186/s40793-015-0078-x  [details] 
  • Salman, V., Yang, T., Berben, T., Klein, F., Angert, E., & Teske, A. (2015). Calcite-accumulating large sulfur bacteria of the genus Achromatium in Sippewissett Salt Marsh. The ISME Journal, 9(11), 2503-2514. DOI: 10.1038/ismej.2015.62  [details] 

2014

  • Sorokin, D. Y., Berben, T., Melton, E. D., Overmars, L., Vavourakis, C. D., & Muyzer, G. (2014). Microbial diversity and biogeochemical cycling in soda lakes. Extremophiles, 18(5), 791-809. DOI: 10.1007/s00792-014-0670-9  [details] 

Talk / presentation

  • Berben, Tom (speaker) (26-8-2016): A transcriptomics study of sulfur metabolism in the haloalkaliphilic sulfur-oxidizingbacterium Thioalkalivibrio thiocyanoxidans ARh 2T, 16th International Symposium on Microbial Ecology, Montréal, Canada.
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No known ancillary activities

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