Institute for Biodiversity and Ecosystem Dynamics

Photographer: UvA

Prof. J. (Jef) Huisman

Professor of Aquatic Microbial Ecology
  • Faculty of Science
    Institute for Biodiversity and Ecosystem Dynamics
  • Visiting address
    Science Park A
    Science Park 904  Room number: C4.221
  • Postal address:
    Postbus  94248
    1090 GE  Amsterdam
  • J.Huisman@uva.nl
    T: 0205257085

2018

  • Luimstra, V. M., Schuurmans, J. M., Verschoor, A. M., Hellingwerf, K. J., Huisman, J., & Matthijs, H. C. P. (2018). Blue light reduces photosynthetic efficiency of cyanobacteria through an imbalance between photosystems I and II. Photosynthesis Research, 138(2), 177-189. DOI: 10.1007/s11120-018-0561-5  [details] 
  • Schuurmans, J. M., Brinkmann, B. W., Makower, A. K., Dittmann, E., Huisman, J., & Matthijs, H. C. P. (2018). Microcystin interferes with defense against high oxidative stress in harmful cyanobacteria. Harmful Algae, 78, 47-55. DOI: 10.1016/j.hal.2018.07.008  [details] 
  • Huisman, J., Codd, G. A., Paerl, H. W., Ibelings, B. W., Verspagen, J. M. H., & Visser, P. M. (2018). Cyanobacterial blooms. Nature Reviews Microbiology, 16, 471 - 483. DOI: 10.1038/s41579-018-0040-1  [details] 
  • Branco, P., Egas, M., Elser, J. J., & Huisman, J. (2018). Eco-Evolutionary Dynamics of Ecological Stoichiometry in Plankton Communities. american naturalist, 192(1), E1-E20. DOI: 10.1086/697472  [details] 
  • Burson, A., Stomp, M., Greenwell, E., Grosse, J., & Huisman, J. (2018). Competition for nutrients and light: testing advances in resource competition with a natural phytoplankton community. Ecology, 99(5), 1108-1118. DOI: 10.1002/ecy.2187  [details] 
  • Linden, B., Huisman, J., & Rinkevich, B. (2018). Circatrigintan instead of lunar periodicity of larval release in a brooding coral species. Scientific Reports, 8, [5668]. DOI: 10.1038/s41598-018-23274-w  [details] 
  • Diao, M., Huisman, J., & Muyzer, G. (2018). Spatio-temporal dynamics of sulfur bacteria during oxic-anoxic regime shifts in a seasonally stratified lake. FEMS Microbiology Ecology, 94(4), [fiy040]. DOI: 10.1093/femsec/fiy040  [details] 
  • Blauw, A. N., Benincà, E., Laane, R. W. P. M., Greenwood, N., & Huisman, J. (2018). Predictability and environmental drivers of chlorophyll fluctuations vary across different time scales and regions of the North Sea. Progress in Oceanography, 161, 1-18. DOI: 10.1016/j.pocean.2018.01.005  [details] 
  • Massoud, E. C., Huisman, J., Beninca, E., Dietze, M. C., Bouten, W., & Vrugt, J. A. (2018). Probing the limits of predictability: data assimilation of chaotic dynamics in complex food webs. Ecology Letters, 21(1), 93-103. DOI: 10.1111/ele.12876  [details] 

2017

2016

2015

2014

  • Burson, A., Matthijs, H. C. P., de Bruijne, W., Talens, R., Hoogenboom, R., Gerssen, A., ... Huisman, J. (2014). Termination of a toxic Alexandrium bloom with hydrogen peroxide. Harmful Algae, 31, 125-135. DOI: 10.1016/j.hal.2013.10.017  [details] 
  • Liu, Q-X., Herman, P. M. J., Mooij, W. M., Huisman, J., Scheffer, M., Olff, H., & van de Koppel, J. (2014). Pattern formation at multiple spatial scales drives the resilience of mussel bed ecosystems. Nature Communications, 5, 5234. DOI: 10.1038/ncomms6234  [details] 
  • Rabouille, S., van de Waal, D. B., Matthijs, H. C. P., & Huisman, J. (2014). Nitrogen fixation and respiratory electron transport in the cyanobacterium Cyanothece under different light/dark cycles. FEMS Microbiology Ecology, 87(3), 630-638. DOI: 10.1111/1574-6941.12251  [details] 
  • Sandrini, G., Matthijs, H. C. P., Verspagen, J. M. H., Muyzer, G., & Huisman, J. (2014). Genetic diversity of inorganic carbon uptake systems causes variation in CO2 response of the cyanobacterium Microcystis. The ISME Journal, 8, 589-600. DOI: 10.1038/ismej.2013.179  [details] 
  • Verspagen, J. M. H., van de Waal, D. B., Finke, J. F., Visser, P. M., van Donk, E., & Huisman, J. (2014). Rising CO2 levels will intensify phytoplankton blooms in eutrophic and hypertrophic lakes. PLoS One, 9(8), [e104325]. DOI: 10.1371/journal.pone.0104325  [details] 
  • Verspagen, J. M. H., van de Waal, D. B., Finke, J. F., Visser, P. M., & Huisman, J. (2014). Contrasting effects of rising CO2 on primary production and ecological stoichiometry at different nutrient levels. Ecology Letters, 17(8), 951-960. DOI: 10.1111/ele.12298  [details] 
  • Visser, F., Miller, P. J. O., Antunes, R. N., Oudejans, M. G., MacKenzie, M. L., Aoki, K., ... Tyack, P. L. (2014). The social context of individual foraging behaviour in long-finned pilot whales (Globicephala melas). Behaviour, 151(10), 1453-1477. DOI: 10.1163/1568539X-00003195  [details] 
  • Wilken, S., Verspagen, J. M. H., Naus-Wiezer, S., van Donk, E., & Huisman, J. (2014). Biological control of toxic cyanobacteria by mixotrophic predators: an experimental test of intraguild predation theory. Ecological Applications, 24(5), 1235-1249. DOI: 10.1890/13-0218.1  [details] 
  • Wilken, S., Verspagen, J. M. H., Naus-Wiezer, S., van Donk, E., & Huisman, J. (2014). Comparison of predator-prey interactions with and without intraguild predation by manipulation of the nitrogen source. Oikos, 123(4), 423-432. DOI: 10.1111/j.1600-0706.2013.00736.x  [details] 
  • den Haan, J., Visser, P. M., Ganase, A. E., Gooren, E. E., Stal, L. J., van Duyl, F. C., ... Huisman, J. (2014). Nitrogen fixation rates in algal turf communities of a degraded versus less degraded coral reef. Coral reefs, 33(4), 1003-1015. DOI: 10.1007/s00338-014-1207-5  [details] 

2013

  • Brauer, V. S., Stomp, M., Rosso, C., van Beusekom, S. A. M., Emmerich, B., Stal, L. J., & Huisman, J. (2013). Low temperature delays timing and enhances the cost of nitrogen fixation in the unicellular cyanobacterium Cyanothece. The ISME Journal, 7, 2105-2115. DOI: 10.1038/ismej.2013.103  [details] 
  • den Haan, J., Huisman, J., Dekker, F., ten Brinke, J. L., Ford, A. K., van Ooijen, J., ... Visser, P. M. (2013). Fast detection of nutrient limitation in macroalgae and seagrass with nutrient-induced fluorescence. PLoS One, 8(7), e68834. DOI: 10.1371/journal.pone.0068834  [details] 
  • Verschoor, A. M., van Dijk, M. A., Huisman, J., & van Donk, E. (2013). Elevated CO2 concentrations affect the elemental stoichiometry and species composition of an experimental phytoplankton community. Freshwater Biology, 58(3), 597-611. DOI: 10.1111/j.1365-2427.2012.02833.x  [details] 
  • Wilken, S., Huisman, J., Naus-Wiezer, S., & van Donk, E. (2013). Mixotrophic organisms become more heterotrophic with rising temperature. Ecology Letters, 16(2), 225-233. DOI: 10.1111/ele.12033  [details] 

2012

  • Blauw, A. N., Beninca, E., Laane, R. W. P. M., Greenwood, N., & Huisman, J. (2012). Dancing with the tides: fluctuations of coastal phytoplankton orchestrated by different oscillatory modes of the tidal cycle. PLoS One, 7(11), [e49319]. DOI: 10.1371/journal.pone.0049319  [details] 
  • Brauer, V. S., Stomp, M., & Huisman, J. (2012). The nutrient-load hypothesis: patterns of resource limitation and community structure driven by competition for nutrients and light. American Naturalist, 179(6), 721-740. DOI: 10.1086/665650  [details] 
  • Krasikov, V., Aguirre von Wobeser, E., Dekker, H. L., Huisman, J., & Matthijs, H. C. P. (2012). Time-series resolution of gradual nitrogen starvation and its impact on photosynthesis in the cyanobacterium Synechocystis PCC 6803. Physiologia Plantarum, 145(3), 426-439. DOI: 10.1111/j.1399-3054.2012.01585.x  [details] 
  • Matthijs, H. C. P., Visser, P. M., Reeze, B., Meeuse, J., Slot, P. C., Wijn, G., ... Huisman, J. (2012). Selective suppression of harmful cyanobacteria in an entire lake with hydrogen peroxide. Water Research, 46(5), 1460-1472. DOI: 10.1016/j.watres.2011.11.016  [details] 

2011

  • Aguirre von Wobeser, E., Ibelings, B. W., Bok, J., Krasikov, V., Huisman, J., & Matthijs, H. C. P. (2011). Concerted changes in gene expression and cell physiology of the cyanobacterium Synechocystis sp. strain PCC 6803 during transitions between nitrogen and light-limited growth. Plant Physiology, 155(3), 1445-1457. DOI: 10.1104/pp.110.165837  [details] 
  • Benincà, E., Dakos, V., van Nes, E. H., Huisman, J., & Scheffer, M. (2011). Resonance of plankton communities with temperature fluctuations. American Naturalist, 178(4), E85-E95. DOI: 10.1086/661902  [details] 
  • Stomp, M., Huisman, J., Mittelbach, G. G., Litchman, E., & Klausmeier, C. A. (2011). Large-scale biodiversity patterns in freshwater phytoplankton. Ecology, 92(11), 2096-2107. DOI: 10.1890/10-1023.1  [details] 
  • Visser, F., Hartman, K. L., Pierce, G. J., Valavanis, V. D., & Huisman, J. (2011). Timing of migratory baleen whales at the Azores in relation to the North Atlantic spring bloom. Marine Ecology - Progress Series, 440, 267-279. DOI: 10.3354/meps09349  [details] 
  • Visser, F., Hartman, K. L., Rood, E. J. J., Hendriks, A. J. E., Zult, D. B., Wolff, W. J., ... Pierce, G. J. (2011). Risso’s dolphins alter daily resting pattern in response to whale watching at the Azores. Marine Mammal Science, 27(2), 366-381. DOI: 10.1111/j.1748-7692.2010.00398.x  [details] 
  • van de Waal, D. B., Verspagen, J. M. H., Finke, J. F., Vournazou, V., Immers, A. K., Kardinaal, W. E. A., ... Huisman, J. (2011). Reversal in competitive dominance of a toxic versus non-toxic cyanobacterium in response to rising CO2. The ISME Journal, 5(9), 1438-1450. DOI: 10.1038/ismej.2011.28  [details] 
  • Gerla, D. J., Mooij, W. M., & Huisman, J. (2011). Photoinhibition and the assembly of light-limited phytoplankton communities. Oikos, 120(3), 359-368. DOI: 10.1111/j.1600-0706.2010.18573.x  [details] 

2010

  • Blauw, A. N., Los, F. J., Huisman, J., & Peperzak, L. (2010). Nuisance foam events and Phaeocystis globosa blooms in Dutch coastal waters analyzed with fuzzy logic. Journal of Marine Systems, 83(3-4), 115-126. DOI: 10.1016/j.jmarsys.2010.05.003  [details] 
  • Branco, P., Stomp, M., Egas, M., & Huisman, J. (2010). Evolution of nutrient uptake reveals a trade-off in the ecological stoichiometry of plant-herbivore interactions. American Naturalist, 176(6), E162-E176. DOI: 10.1086/657036  [details] 
  • Huisman, J. (2010). Comment on "Patterns of diversity in marine phytoplankton". Science, 329(5991), 512-512. DOI: 10.1126/science.1189880  [details] 
  • Wilken, S., Wiezer, S., Huisman, J., & van Donk, E. (2010). Microcystins do not provide anti-herbivore defence against mixotrophic flagellates. Aquatic Microbial Ecology, 59(3), 207-216. DOI: 10.3354/ame01395  [details] 
  • van de Waal, D. B., Ferreruela, G., Tonk, L., van Donk, E., Huisman, J., Visser, P. M., & Matthijs, H. C. P. (2010). Pulsed nitrogen supply induces dynamic changes in the amino acid composition and microcystin production of the harmful cyanobacterium Planktothrix agardhii. FEMS Microbiology Ecology, 74(2), 430-438. DOI: 10.1111/j.1574-6941.2010.00958.x  [details] 
  • van de Waal, D. B., Verschoor, A. M., Verspagen, J. M. H., van Donk, E., & Huisman, J. (2010). Climate-driven changes in the ecological stoichiometry of aquatic ecosystems. Frontiers in Ecology and the Environment, 8(3), 145-152. DOI: 10.1890/080178  [details] 

2009

  • Beninca, E., Jöhnk, K., Heerkloss, R., & Huisman, J. (2009). Coupled predator-prey oscillations in a chaotic food web. Ecology Letters, 12(12), 1367-1378. DOI: 10.1111/j.1461-0248.2009.01391.x  [details] 
  • Dakos, V., Benincà, E., van Nes, E. H., Philippart, C. J. M., Scheffer, M., & Huisman, J. (2009). Interannual variability in species composition explained as seasonally entrained chaos. Proceedings of the Royal Society B-Biological Sciences, 276(1669), 2871-2880. DOI: 10.1098/rspb.2009.0584  [details] 
  • Haverkamp, T. H. A., Schouten, D., Doeleman, M., Wollenzien, U., Huisman, J., & Stal, L. J. (2009). Colorful microdiversity of Synechococcus strains (picocyanobacteria) isolated from the Baltic Sea. The ISME Journal, 3(4), 397-408. DOI: 10.1038/ismej.2008.118  [details] 
  • Tonk, L., Welker, M., Huisman, J., & Visser, P. M. (2009). Production of cyanopeptolins, anabaenopeptins, and microcystins by the harmful cyanobacteria Anabaena 90 and Microcystis PCC 7806. Harmful Algae, 8(2), 219-224. DOI: 10.1016/j.hal.2008.05.005  [details] 
  • van de Waal, D. B., Verspagen, J. M. H., Lürling, M., van Donk, E., Visser, P. M., & Huisman, J. (2009). The ecological stoichiometry of toxins produced by harmful cyanobacteria: An experimental test of the carbon-nutrient balance hypothesis. Ecology Letters, 12(12), 1326-1335. DOI: 10.1111/j.1461-0248.2009.01383.x  [details] 
  • Acinas, S. G., Haverkamp, T. H. A., Huisman, J., & Stal, L. J. (2009). Phenotypic and genetic diversification of Pseudanabaena spp. (cyanobacteria). The ISME Journal, 3(1), 31-46. DOI: 10.1038/ismej.2008.78  [details] 
  • Paerl, H. W., & Huisman, J. (2009). Climate change: A catalyst for global expansion of harmful cyanobacterial blooms. Environmental Microbiology Reports, 1(1), 27-37. DOI: 10.1111/j.1758-2229.2008.00004.x  [details] 

2008

  • Benincà, E., Huisman, J., Heerkloss, R., Jöhnk, K. D., Branco, P., van Nes, E. H., ... Ellner, S. P. (2008). Chaos in a long-term experiment with a plankton community. Nature, 451(7180), 822-825. DOI: 10.1038/nature06512  [details] 
  • Haverkamp, T., Acinas, S. G., Doeleman, M., Stomp, M., Huisman, J., & Stal, L. J. (2008). Diversity and phylogeny of Baltic Sea picocyanobacteria inferred from their ITS and phycobiliprotein operons. Environmental Microbiology, 10(1), 174-188. DOI: 10.1111/j.1462-2920.2007.01442.x  [details] 
  • Jöhnk, K. D., Huisman, J., Sharples, J., Sommeijer, B., Visser, P. M., & Stroom, J. M. (2008). Summer heatwaves promote blooms of harmful cyanobacteria. Global Change Biology, 14, 495-512. DOI: 10.1111/j.1365-2486.2007.01510.x  [details] 
  • Passarge, J., & Huisman, J. (2008). Microbial communities. In S. E. Jørgensen, & B. D. Fath (Eds.), Encyclopedia of ecology (pp. 2328-2334). Oxford: Elsevier. DOI: 10.1016/B978-008045405-4.00652-2  [details] 
  • Stomp, M., van Dijk, M. A., van Overzee, H. M. J., Wortel, M. T., Sigon, C. A. M., Egas, M., ... Huisman, J. (2008). The timescale of phenotypic plasticity and its impact on competition in fluctuating environments. American Naturalist, 172(5), E169-E185. DOI: 10.1086/591680  [details] 
  • Tonk, L., van de Waal, D. B., Slot, P., Huisman, J., Matthijs, H. C. P., & Visser, P. M. (2008). Amino acid availability determines the ratio of microcystin variants in the cyanobacterium Planktothrix agardhii. FEMS Microbiology Ecology, 65(3), 383-390. DOI: 10.1111/j.1574-6941.2008.00541.x  [details] 
  • Atamna-Ismaeel, N., Sabehi, G., Sharon, I., Witzel, K. P., Labrenz, M., Jürgens, K., ... Beja, O. (2008). Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems. The ISME Journal, 2, 656-662. DOI: 10.1038/ismej.2008.27  [details] 
  • Paerl, H. W., & Huisman, J. (2008). Blooms like it hot. Science, 320, 57-58. DOI: 10.1126/science.1155398  [details] 

2007

  • Agawin, N. S., Rabouille, S., Veldhuis, M., Servatius, L., Hol, S., van Overzee, H. M. J., & Huisman, J. (2007). Competition and facilitation between unicellular nitrogen-fixing cyanobacteria and non-nitrogen-fixing phytoplankton species. Limnology and Oceanography, 52(5), 2233-2248. DOI: 10.4319/lo.2007.52.5.2233  [details] 
  • Kardinaal, W. E. A., Janse, I., Kamst-van Agterveld, M., Meima, M., Snoek, J., Mur, L. R., ... Visser, P. M. (2007). Microcystis genotype succession in relation to microcystin concentrations in freshwater lakes. Aquatic Microbial Ecology, 48(1), 1-12. DOI: 10.3354/ame048001  [details] 
  • Kardinaal, W. E. A., Tonk, L., Janse, I., Hol, S., Slot, P., Huisman, J., & Visser, P. M. (2007). Competition for Light between Toxic and Nontoxic Strains of the Harmful Cyanobacterium Microcystis. Applied and Environmental Microbiology, 73(9), 2939-2946. DOI: 10.1128/AEM.02892-06  [details] 
  • Stomp, M., Huisman, J., Pick, F. R., Laamanen, M., Haverkamp, T. H. A., & Stal, L. J. (2007). Colourful coexistence of red and green picocyanobacteria in lakes and seas. Ecology Letters, 10, 290-298. DOI: 10.1111/j.1461-0248.2007.01026.x  [details] 
  • Stomp, M., Huisman, J., Stal, L. J., & Matthijs, H. C. P. (2007). Colorful niches of phototrophic microorganisms shaped by vibrations of the water molecule. The ISME Journal, 1, 271-282. DOI: 10.1038/ismej.2007.59  [details] 
  • Tonk, L., Bosch, K., Visser, P. M., & Huisman, J. (2007). Salt tolerance of the harmful cyanobacterium Microcystis aeruginosa. Aquatic Microbial Ecology, 46, 117-123. DOI: 10.3354/ame046117  [details] 
  • De Senerpont Domis, L. N., Mooij, W. M., & Huisman, J. (2007). Climate-induced shifts in an experimental phytoplankton community: a mechanistic approach. Hydrobiologia, 584(1), 403-413. DOI: 10.1007/s10750-007-0609-6  [details] 
  • Wilson, J. B., Spijkerman, E., & Huisman, J. (2007). Is There Really Insufficient Support for Tilman's R* Concept? A comment on Miller et al. American Naturalist, 169(5), 700-706. DOI: 10.1086/513113  [details] 

2006

  • Huisman, J., Pham Thi, N. N., Karl, D. M., & Sommeijer, B. (2006). Reduced mixing generates oscillations and chaos in the oceanic deep chlorophyll maximum. Nature, 439(19), 322-325. DOI: 10.1038/nature04245  [details] 
  • Passarge, J., Hol, S., Escher, M., & Huisman, J. (2006). Competition for nutrients and light: Stable coexistence, alternative stable states or competitive exclusion? Ecological Monographs, 76(1), 57-72. DOI: 10.1890/04-1824  [details] 
  • Verspagen, J. M. H., Passarge, J., Jöhnk, K., Visser, P. M., Peperzak, L., Boers, P., ... Huisman, J. (2006). Water management strategies against toxic Microcystis blooms in the Dutch delta. Ecological Applications, 16(1), 313-327. DOI: 10.1890/04-1953  [details] 
  • Verspagen, J. M. H., Visser, P. M., & Huisman, J. (2006). Aggregation with clay causes sedimentation of the buoyant cyanobacteria Microcystis spp. Aquatic Microbial Ecology, 44(1), 165-174. DOI: 10.3354/ame044165  [details] 

2005

  • Huisman, J., & Hulot, F. (2005). Population dynamics of harmful cyanobacteria: factors affecting species composition. In J. Huisman, H. C. P. Matthijs, & P. M. Visser (Eds.), Harmful Cyanobacteria (pp. 143-176). (Aquatic Ecology Series). Dordrecht, The Netherlands: Springer. [details] 
  • Huisman, J., Matthijs, H. C. P., & Visser, P. M. (2005). Harmful Cyanobacteria. (Aquatic Ecology Series). Dordrecht, The Netherlands: Springer. [details] 
  • Pham Thi, N. N., Huisman, J., & Sommeijer, B. P. (2005). Simulation of three-dimensional phytoplankton dynamics: competition in light-limited environments. Journal of Computational and Applied Mathematics, 174(1), 57-77. DOI: 10.1016/j.cam.2004.03.023  [details] 
  • Tonk, L., Visser, P. M., Christiansen, G., Dittmann, E., Snelder, E. O. F. M., Wiedner, C., ... Huisman, J. (2005). The microcystin composition of the cyanobacterium Planktothrix agardhii changes toward a more toxic variant with increasing light intensity. Applied and Environmental Microbiology, 71(9), 5177-5181. DOI: 10.1128/AEM.71.9.5177-5181.2005  [details] 
  • Verspagen, J. M. H., Snelder, E. O. F. M., Visser, P. M., Jöhnk, K., Ibelings, B. W., Mur, L. R., & Huisman, J. (2005). Benthic-pelagic coupling in the population dynamics of the harmful cyanobacterium Microcystis. Freshwater Biology, 50, 854-867. DOI: 10.1111/j.1365-2427.2005.01368.x  [details] 
  • Irigoien, X., Huisman, J., & Harris, R. P. (2005). Different measures of biodiversity.- reply. Nature, 433, E9. [details] 

2004

  • Huisman, J., Sharples, J., Stroom, J. M., Visser, P. M., Kardinaal, W. E. A., Verspagen, J. M. H., & Sommeijer, B. (2004). Changes in turbulent mixing shift competition for light between phytoplankton species. Ecology, 85(11), 2960-2970. DOI: 10.1890/03-0763  [details] 
  • Hulot, F., & Huisman, J. (2004). Allelopathic interactions between phytoplankton species: the roles of heterotrophic bacteria and mixing intensity. Limnology and Oceanography, 49(4), 1424-1434. DOI: 10.4319/lo.2004.49.4_part_2.1424  [details] 
  • Stomp, M., Huisman, J., de Jongh, F., Veraart, A. J., Gerla, D., Rijkeboer, M., ... Stal, L. J. (2004). Adaptive divergence in pigment composition promotes phytoplankton biodiversity. Nature, 432, 104-107. DOI: 10.1038/nature03044  [details] 
  • Verspagen, J. M. H., Snelder, E. O. F. M., Visser, P. M., Huisman, J., Mur, L. R., & Ibelings, B. W. (2004). Recruitment of benthic Microcystis (Cyanophyceae) to the water column: internal buoyancy changes or resuspension? Journal of phycology, 40, 260-270. DOI: 10.1111/j.1529-8817.2004.03174.x  [details] 
  • Irigoien, X., Huisman, J., & Harris, R. P. (2004). Global biodiversity patterns of marine phytoplankton and zooplankton. Nature, 429, 863-867. DOI: 10.1038/nature02593  [details] 
  • Kuang, Y., Huisman, J., & Elser, J. J. (2004). Stoichiometric plant-herbivore models and their interpretation. Mathematical Biosciences and Engineering, 1(2), 215-222. [details] 

2016

  • Huisman, J., & Visser, P. M. (2016). Licht en leven was zijn passie (in memoriam Hans Matthijs). BioNieuws, 26, 13. [details] 

2007

  • Aguirre von Wobeser, E., Krasikov, V., Ibelings, B. W., Bok, J. M., Huisman, J., & Matthijs, H. C. P. (2007). Genome-wide transcription responses of a cyanobacterium to light and nitrogen limitation in a chemostat. In Abstracts 2nd FEMS Congress of European Microbiologists (pp. 87). Madrid, Spain. [details] 
  • Visser, P. M., Kardinaal, W. E. A., Tonk, L., Janse, I., Hol, S., Slot, P. C., & Huisman, J. (2007). Competition for light between toxic and non-toxic strains of the harmful cyanobacterium Microcystis. In Abstract book (pp. 34). Rio de Janeiro State, Brazil. [details] 

2006

  • Aguirre von Wobeser, E., Krasikov, V., Eisenhut, M., Hagemann, M., Ibelings, B. W., Huisman, J., & Matthijs, H. C. P. (2006). Differences and similarities of transcription responses of Synechocystis to various environmental stresses. In Abstracts 12th international symposium of photosynthetic prokaryotes (pp. 110). Pau, France. [details] 
  • Beninca, E., Jöhnk, K., Heerkloss, R., Scheffer, M., & Huisman, J. (2006). Time series analysis of plankton community dynamics in a long-term mesocosm study. In ASLO Abstract book summer meeting (pp. 11). Victoria, Canada. [details] 
  • Huisman, J., Pham Thi, N. N., Karl, D. M., & Sommeijer, B. (2006). Reduced mixing generates oscillations and chaos in the oceanic deep chlorophyll maximum. In ASLO Abstract book summer meeting (pp. 56). Victoria, Canada. [details] 
  • Jöhnk, K., Huisman, J., Sharples, J., Sommeijer, B. P., Visser, P. M., & Stroom, J. (2006). Summer heatwaves promote blooms of harmful cyanobacteria. In ASLO Abstract book summer meeting (pp. 60). Victoria, Canada. [details] 
  • Krasikov, V., Aguirre von Wobeser, E., Dekker, H. L., Ibelings, B., Huisman, J., & Matthijs, H. C. P. (2006). Nitrogen starvation and its impact on photosynthesis in the cyanobacterium Synechocystis sp. strain PCC 6803. In Abstracts 12th international symposium of photosynthetic prokaryotes Pau, France. [details] 
  • Tonk, L., Visser, P. M., Welker, M., & Huisman, J. (2006). The cyanotoxin production of microcystis and anabaena show a similar response to environmental factors. In ASLO Abstract book summer meeting (pp. 122). Victoria, Canada. [details] 
  • van de Waal, D. B., Rabouille, S., & Huisman, J. (2006). Influence of the day-night cycle on nitrogen fixation by unicellular marine cyanobacteria. In ASLO Abstract book summer meeting (pp. 125). Victoria, Canada. [details] 

2005

  • Aguirre von Wobeser, E., Huisman, J., Ibelings, B., & Matthijs, H. C. P. (2005). A newly designed 45 to 60 mer oligonucleotide Agilent platform microarray for global gene expression studies of Synechocystis PCC6803: example salt stress experiment. In H. C. P. Matthijs (Ed.), Genomics, Proteomics and Structure for Functional Understanding (pp. 70). UvA Amsterdam NL: ESF (European Science Foundation). [details] 
  • Aguirre von Wobeser, E., Huisman, J., Ibelings, B. W., & Matthijs, H. C. P. (2005). Global gene expression analysis under salt stress using a newly designed long oligonucleotide microarray (Synechocystis PCC6803. In H. C. P. Matthijs, & A. Gwizdek-Wisniewska (Eds.), The 6th European Workshop on the Molecular Biology of Cyanobacteria (pp. 113). Gdansk: Fundacja Rozwoju Uniwersytetu Gdanskiego. [details] 
  • Aguirre von Wobeser, E., Krasikov, V., Huisman, J., Matthijs, H. C. P., & Ibelings, B. W. (2005). Physiological and gene expression changes of Synechocytis PCC6803 under nitrogen-limited growth in continuous culture. In H. C. P. Matthijs, & A. Gwizdek-Wisniewska (Eds.), The 6th European Workshop on the Molecular Biology of Cyanobacteria (pp. 69). Gdansk: Fundacja Rozwoju Uniwersytetu Gdanskiego. [details] 
  • Huisman, J., Matthijs, H. C. P., & Visser, P. M. (2005). Harmful cyanobacteria. (Aquatic Ecology Series). Dordrecht: Springer. [details] 
  • Jöhnk, K., & Huisman, J. (2005). Meteorological and hydrodynamical forcing of plankton dynamics. In ASLO Abstract book summer meeting (pp. 75). Santiago de Compostela, Spain. [details] 
  • Krasikov, V., Aguirre von Wobeser, E., Dekker, H. L., Huisman, J., & Matthijs, H. C. P. (2005). Transcriptome versus proteomics: the response of Synechocystis sp. PCC6803 to nitrogen starvation. In H. C. P. Matthijs, & A. Gwizdek-Wisniewska (Eds.), The 6th European Workshop on the Molecular Biology of Cyanobacteria (pp. 118). Gdansk: Fundacja Rozwoju Uniwersytetu Gdanskiego. [details] 
  • Krasikov, V., Aguirre von Wobeser, E., Huisman, J., Ibelings, B., & Matthijs, H. C. P. (2005). Genome-wide responses of Synechocystis PCC6803 to nitrogen deprivation. In H. C. P. Matthijs (Ed.), Genomics, Proteomics and Structure for Functional Understanding (pp. 72). UvA Amsterdam The Netherlands: ESF (European Science Foundation). [details] 
  • Krasikov, V., Aguirre von Wobeser, E., Huisman, J., Ibelings, B. W., & Matthijs, H. C. P. (2005). Genome-wide responses of Synechocystis PCC6803 to nitrogen deprivation. In H. C. P. Matthijs, & A. Gwizdek-Wisniewska (Eds.), The 6th European Workshop on the Molecular Biology of Cyanobacteria (pp. 71). Gdansk: Fundacja Rozwoju Uniwersytetu Gdanskiego. [details] 
  • Krasikov, V., Aguirre von Wobeser, E., Yeremenko, N., Dekker, H. L., Huisman, J., & Matthijs, H. C. P. (2005). The response of synechocystis sp. pcc 6803 to nitrogen starvation: transcriptomics versus proteomics. In A. Van der Est, & D. Bruce (Eds.), Photosynthesis: Fundamental Aspects to Global Perspectives (pp. 1008-1010). Lawrence, Canada: Alliance Communications Group Publ.. [details] 
  • Verspagen, J. M. H., Boers, P., Laanbroek, H. L., & Huisman, J. (2005). Doorspoelen of opzouten? Bestrijding van blauwalgen in het Volkerak-Zoommeer. Amsterdam: UvA, NIOO-KNAW; RIZA; Rijkswaterstaat Zeeland. [details] 

2004

  • Huisman, J., Irigoien, X., & Harris, R. P. (2004). Global biodiversity patterns of marine phytoplankton and zooplankton. Nature, 429, 863-867. DOI: 10.1038/nature02593  [details] 
  • Huisman, J., Sharples, J., Stroom, J., Visser, P. M., Kardinaal, W. E. A., Verspagen, J. M. H., & Sommeijer, B. (2004). Changes in turbulent mixing shift competition for light between phytoplankton species. Ecology, 85, 2960-2970. DOI: 10.1890/03-0763  [details] 
  • Huisman, J., Stomp, M., de Jongh, F., Veraart, A. J., Gerla, D., Rijkeboer, M., ... Stal, L. J. (2004). Adaptive divergence in pigment composition promotes phytoplankton biodiversity. Nature, 432, 104-107. DOI: 10.1038/nature03044  [details] 
  • Jöhnk, K., Straile, D., & Huisman, J. (2004). Lake stratification under climatic change. In Climate Change & Aquatic Systems - Past, Present, Future, Book of Abstracts (pp. 51). Plymouth, United Kingdom. [details] 
  • Hulot, F., & Huisman, J. (2004). Allelopathic interactions between phytoplankton species : the roles of heterotrophic bacteria and mixing intensity. Limnology and Oceanography, 49, 1424-1434. DOI: 10.4319/lo.2004.49.4_part_2.1424  [details] 
  • Kuang, Y., Huisman, J., & Elser, J. J. (2004). Stoichiometric plant-herbivore models and their interpretation. Mathematical Biosciences and Engineering, 1, 215-222. [details] 

2013

  • de Senerpont Domis, L., van Donk, E., Lürling, M., Huisman, J., & van Dam, H. (2013). Olivijn lost blauwalgenbloei niet op. H2O, 46(11), 15. [details] 
  • de Bruijne, W. J. J., Huisman, J., Matthijs, H., Burson, A., & Visser, P. M. (2013). Bestrijding van de dinoflagellaat Alexandrium ostenfeldii in de Ouwerkerkse Kreek met waterstofperoxide. Apeldoorn: Arcadis Nederland BV. [details] 

2009

  • Huisman, J., & Rabouille, S. (2009). [Review of: T. Kiørboe (2008) A mechanistic approach to plankton ecology]. Limnology and Oceanography Bulletin, 18(2), 52-54. [details] 

2006

  • Huisman, J., & Sommeijer, B. (2006). Global Warning could Destabilize Plankton in Oceans. ERCIM News, 65, 42-43. [details] 
  • Passarge, J., & Huisman, J. (2006). Peer review van het algen model BLOOM II. Amsterdam: IBED-AMB. [details] 

2004

  • Huisman, J., & Jöhnk, K. (2004). Simulation of the population development of the toxic cyanobacterium Microcystis under proposed heated water inflow scenarios. Phase 3: calibration of the model. amsterdam: ibed.amb. [details] 
  • Huisman, J., & Jöhnk, K. (2004). Simulation of the population development of the toxic cyanobacterium Microcystis under proposed heated water inflow scenarios. Phase 4: simulations for confined heat input. amsterdam: IBED-AMB. [details] 
  • Huisman, J., Jöhnk, K., & Sommeijer, B. (2004). Simulation of the population development of the toxic cyanobacterium Microcystis in Lake Nieuwe Meer under proposed heated water inflow scenarios. Phase 2: A fully developed model of vertical turbulent diffusivity and various climate scenarios. amsterdam: ibed/amb. [details] 
  • Huisman, J., Jöhnk, K., & Sommeijer, B. P. (2004). Simulation of the population development of the toxic cyanobacterium Microcystis under proposed heated water inflow scenarios. Phase 2a: A fully developed model of vertical turbulent diffusivity and various climate scenarios - simulations for additional inflow scenarios. amsterdam: ibed/amb. [details] 
  • Huisman, J., Jöhnk, K., Sommeijer, B., Sharples, J., Visser, P. M., Stroom, J., ... Schaub, B. (2004). Intermittent Mixing in Lake Nieuwe Meer. Field Experiment and Model Simulations 2003. amsterdam: ibed/amb. [details] 

2018

2017

  • Burridge, A. K. (2017). Marine biogeography and evolution: Diversity patterns of planktonic gastropods and amphipods [details] 

2013

  • Wilken, S. (2013). Mixotrophs in aquatic ecosystems: linking physiology to food web dynamics

2010

2008

2007

  • Kardinaal, W. E. A. (2007). Who’s bad? : molecular identification reveals seasonal dynamics of toxic and non-toxic freshwater cyanobacteria Amsterdam: UvA Universiteit van Amsterdam, IBED [details] 
  • Tonk, L. (2007). Impact of environmental factors on toxic and bioactive peptide production by harmful cyanobacteria Amsterdam: UvA Universiteit van Amsterdam, IBED [details] 

2006

  • Pham Thi, N. N. (2006). Numerical analysis of phytoplankton dynamics [details] 
  • Verspagen, J. M. H. (2006). Benthic-pelagic coupling in the population dynamics of the cyanobacterium Microcystis
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