Prof. J. (Jef) Huisman
Professor of Aquatic Microbial Ecology
Faculty of Science
Institute for Biodiversity and Ecosystem Dynamics
Visiting address
- Science Park 904
- Room number: C4.221
Postal address
-
Postbus 94240
1090 GE Amsterdam
Contact details
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Publications
- refereed (140)
- academic (22)
- professional (12)
- popular scientific (7)
- supervised theses (32)
- datasets (24)
2025
- Flaucher, I., van der Laan, M., Huisman, J., & Schall, P. (2025). Spectral Shaping by Radiative Energy Transfer in CsPbBr3 Nanocrystal-Dye Mixtures. ACS Applied Optical Materials, 3(4), 1036-1043. https://doi.org/10.1021/acsaom.5c00098
- Soja-Woźniak, M., Holtrop, T., Woutersen, S., van der Woerd, H. J., Lund-Hansen, L. C., & Huisman, J. (2025). Loss of sea ice alters light spectra for aquatic photosynthesis. Nature Communications, 16(1), 4059. https://doi.org/10.1038/s41467-025-59386-x
2024
Coe, A., Braakman, R., Biller, S. J., Arellano, A., Bliem, C., Vo, N. N., von Emster, K., Thomas, E., DeMers, M., Steglich, C., Huisman, J., & Chisholm, S. W. (2024). Emergence of metabolic coupling to the heterotroph Alteromonas promotes dark survival in Prochlorococcus. ISME Communications, 4(1), Article ycae131. https://doi.org/10.1093/ismeco/ycae131 [details]- Crowther, T. W., Rappuoli, R., Corinaldesi, C., Danovaro, R., Donohue, T. J., Huisman, J., Stein, L. Y., Timmis, J. K., Timmis, K., Anderson, M. Z., Bakken, L. R., Baylis, M., Behrenfeld, M. J., Boyd, P. W., Brettell, I., Cavicchioli, R., Delavaux, C. S., Foreman, C. M., Jansson, J. K., ... van Galen, L. G. (2024). Scientists’ call to action: Microbes, planetary health, and the Sustainable Development Goals. Cell, 187(19), 5195-5216. https://doi.org/10.1016/j.cell.2024.07.051
- Koppelle, S., Ivanković, M., Bengtsson, M. M., Preiler, C., Huisman, J., Brussaard, C. P. D., Engelmann, J. C., Ptáčník, R., & Wilken, S. (2024). Contrasting responses of different mixotrophic protists to light and nutrient availability. Limnology and Oceanography, 69(5), 1233-1246. https://doi.org/10.1002/lno.12565 [details]
- Meyer, C., Jackson, V. L. N., Harrison, K., Fouskari, I., Bolhuis, H., Artzy-Randrup, Y. A., Huisman, J., Monier, A., & Brussaard, C. P. D. (2024). Temperature modulates dominance of a superinfecting Arctic virus in its unicellular algal host. The ISME Journal, 18(1), Article wrae161. https://doi.org/10.1093/ismejo/wrae161 [details]
- Piel, T., Sandrini, G., Weenink, E. F. J., Qin, H., van Herk, M. J., Léon Morales-Grooters, M., Schuurmans, J. M., Slot, P. C., Wijn, G., Arntz, J., Zervou, S.-K., Kaloudis, T., Hiskia, A., Huisman, J., & Visser, P. M. (2024). Shifts in phytoplankton and zooplankton communities in three cyanobacteria-dominated lakes after treatment with hydrogen peroxide. Harmful Algae, 133, Article 102585. https://doi.org/10.1016/j.hal.2024.102585 [details]
- Tack, L. F. J., Vonk, J. A., van Riel, M. C., de Leeuw, J. J., Koopman, J., Maathuis, M. A. M., Schilder, K., van Hall, R. L., Huisman, J., & van der Geest, H. G. (2024). Food webs in isolation: The food-web structure of a freshwater reservoir with armoured shores in a former coastal bay area. The Science of the Total Environment, 925, Article 171780. https://doi.org/10.1016/j.scitotenv.2024.171780 [details]
- Van de Waal, D. B., Gsell, A. S., Harris, T., Paerl, H. W., de Senerpont Domis, L. N., & Huisman, J. (2024). Hot summers raise public awareness of toxic cyanobacterial blooms. Water Research, 249, Article 120817. https://doi.org/10.1016/j.watres.2023.120817 [details]
2023
- Diao, M., Balkema, C., Suárez-Muñoz, M., Huisman, J., & Muyzer, G. (2023). Succession of bacteria and archaea involved in the nitrogen cycle of a seasonally stratified lake. FEMS Microbiology Letters, 370, Article fnad013. https://doi.org/10.1093/femsle/fnad013 [details]
- Kort, R., Arts, K., Antó, J. M., Berg, M. P., Cepella, G., Cole, J., van Doorn, A., van Gorp, T., Grootjen, M., Gupta, J., Hill, C., van der Heide, E., Huisman, J., Janmaat, J., O'Callaghan-Gordo, C., Mattijsen, J., Modi, T., Nowak, E., Ossebaard, H. C., ... Martens, P. (2023). Outcomes from the First European Planetary Health Congress at ARTIS, Amsterdam. Challenges, 14(4), Article 49. https://doi.org/10.3390/challe14040049
- Qin, H., Sandrini, G., Piel, T., Slot, P. C., Huisman, J., & Visser, P. M. (2023). The harmful cyanobacterium Microcystis aeruginosa PCC7806 is more resistant to hydrogen peroxide at elevated CO2. Harmful Algae, 128, Article 102482. https://doi.org/10.1016/j.hal.2023.102482 [details]
2022
- Koppelle, S., López-Escardó, D., Brussaard, C. P. D., Huisman, J., Philippart, C. J. M., Massana, R., & Wilken, S. (2022). Mixotrophy in the bloom-forming genus Phaeocystis and other haptophytes. Harmful Algae, 117, Article 102292. https://doi.org/10.1016/j.hal.2022.102292 [details]
- Kornder, N. A., Esser, Y., Stoupin, D., Leys, S. P., Mueller, B., Vermeij, M. J. A., Huisman, J., & de Goeij, J. M. (2022). Sponges sneeze mucus to shed particulate waste from their seawater inlet pores. Current Biology, 32(17), 3855-3861.e3. Advance online publication. https://doi.org/10.1016/j.cub.2022.07.017 [details]
- Mueller, B., Brocke, H. J., Rohwer, F. L., Dittmar, T., Huisman, J., Vermeij, M. J. A., & de Goeij, J. M. (2022). Nocturnal dissolved organic matter release by turf algae and its role in the microbialization of reefs. Functional Ecology, 36(8), 2104-2118. https://doi.org/10.1111/1365-2435.14101 [details]
- Verspagen, J. M. H., Ji, X., Liu, Q-X., & Huisman, J. (2022). Large-scale variation in phytoplankton community composition of >1000 lakes across the USA. Environmental Research: Ecology, 1(1), Article 015001 . https://doi.org/10.1088/2752-664X/ac788c [details]
- Weenink, E. F. J., Kraak, M. H. S., van Teulingen, C., Kuijt, S., van Herk, M. J., Sigon, C. A. M., Piel, T., Sandrini, G., Leon-Grooters, M., de Baat, M. L., Huisman, J., & Visser, P. M. (2022). Sensitivity of phytoplankton, zooplankton and macroinvertebrates to hydrogen peroxide treatments of cyanobacterial blooms. Water Research, 225, Article 119169. https://doi.org/10.1016/j.watres.2022.119169 [details]
2021
- Biggs, T. E. G., Huisman, J., & Brussaard, C. P. D. (2021). Viral lysis modifies seasonal phytoplankton dynamics and carbon flow in the Southern Ocean. ISME Journal, 15(12), 3615–3622. https://doi.org/10.1038/s41396-021-01033-6 [details]
- Holtrop, T., Huisman, J., Stomp, M., Biersteker, L., Aerts, J., Grébert, T., Partensky, F., Garczarek, L., & van der Woerd, H. J. (2021). Vibrational modes of water predict spectral niches for photosynthesis in lakes and oceans. Nature Ecology & Evolution, 5(1), 55-66. https://doi.org/10.1038/s41559-020-01330-x [details]
- Kornder, N. A., Cappelletto, J., Mueller, B., Zalm, M. J. L., Martinez, S. J., Vermeij, M. J. A., Huisman, J., & de Goeij, J. M. (2021). Implications of 2D versus 3D surveys to measure the abundance and composition of benthic coral reef communities. Coral reefs, 40(4), 1137-1153. https://doi.org/10.1007/s00338-021-02118-6 [details]
- Mekkes, L., Renema, W., Bednaršek, N., Alin, S. R., Feely, R. A., Huisman, J., Roessingh, P., & Peijnenburg, K. T. C. A. (2021). Pteropods make thinner shells in the upwelling region of the California Current Ecosystem. Scientific Reports, 11, Article 1731. https://doi.org/10.1038/s41598-021-81131-9 [details]
- Mekkes, L., Sepúlveda-Rodríguez, G., Bielkinaitė, G., Wall-Palmer, D., Brummer, G.-JA., Dämmer, L. K., Huisman, J., van Loon, E., Renema, W., & Peijnenburg, K. T. C. A. (2021). Effects of Ocean Acidification on Calcification of the Sub-Antarctic Pteropod Limacina retroversa. Frontiers in Marine Science, 8, Article 581432. https://doi.org/10.3389/fmars.2021.581432 [details]
- Piel, T., Sandrini, G., Muyzer, G., Brussaard, C. P. D., Slot, P. C., van Herk, M. J., Huisman, J., & Visser, P. M. (2021). Resilience of microbial communities after hydrogen peroxide treatment of a eutrophic lake to suppress harmful cyanobacterial blooms. Microorganisms, 9(7), Article 1495. https://doi.org/10.3390/microorganisms9071495 [details]
- Visser, F., Keller, O. A., Oudejans, M. G., Nowacek, D. P., Kok, A. C. M., Huisman, J., & Sterck, E. H. M. (2021). Risso's dolphins perform spin dives to target deep-dwelling prey. Royal Society Open Science, 8(12), Article 202320. https://doi.org/10.1098/rsos.202320 [details]
- Weenink, E. F. J., Matthijs, H. C. P., Schuurmans, J. M., Piel, T., van Herk, M. J., Sigon, C. A. M., Visser, P. M., & Huisman, J. (2021). Interspecific protection against oxidative stress: Green algae protect harmful cyanobacteria against hydrogen peroxide. Environmental Microbiology, 23(5), 2404-2419. https://doi.org/10.1111/1462-2920.15429 [details]
- van der Lee, G. H., Vonk, J. A., Verdonschot, R. C. M., Kraak, M. H. S., Verdonschot, P. F. M., & Huisman, J. (2021). Eutrophication induces shifts in the trophic position of invertebrates in aquatic food webs. Ecology, 102(3), Article e03275. https://doi.org/10.1002/ecy.3275 [details]
2020
- Branco, P., Egas, M., Hall, S. R., & Huisman, J. (2020). Why do phytoplankton evolve large size in response to grazing? American Naturalist, 195(1), E20–E37. https://doi.org/10.1086/706251 [details]
- Burford, M. A., Carey, C. C., Hamilton, D. P., Huisman, J., Paerl, H. W., Wood, S. A., & Wulff, A. (2020). Perspective: Advancing the research agenda for improving understanding of cyanobacteria in a future of global change. Harmful Algae, 91, Article 101601. https://doi.org/10.1016/j.hal.2019.04.004 [details]
- Chen, Q., Shi, W., Huisman, J., Maberly, S. C., Zhang, J., Yu, J., Chen, Y., Tonina, D., & Yi, Q. (2020). Hydropower reservoirs on the upper Mekong River modify nutrient bioavailability downstream. National Science Review, 7(9), 1449–1457. https://doi.org/10.1093/nsr/nwaa026 [details]
- Ji, X., Verspagen, J. M. H., Van de Waal, D. B., Rost, B., & Huisman, J. (2020). Phenotypic plasticity of carbon fixation stimulates cyanobacterial blooms at elevated CO2. Science Advances, 6(8), Article eaax2926. https://doi.org/10.1126/sciadv.aax2926 [details]
- Luimstra, V. M., Schuurmans, J. M., Hellingwerf, K. J., Matthijs, H. C. P., & Huisman, J. (2020). Blue light induces major changes in the gene expression profile of the cyanobacterium Synechocystis sp. PCC 6803. Physiologia Plantarum, 170(1), 10-26. Advance online publication. https://doi.org/10.1111/ppl.13086 [details]
- Luimstra, V. M., Verspagen, J. M. H., Xu, T., Schuurmans, J. M., & Huisman, J. (2020). Changes in water color shift competition between phytoplankton species with contrasting light-harvesting strategies. Ecology, 101(3), Article e02951. https://doi.org/10.1002/ecy.2951 [details]
- Piel, T., Sandrini, G., White, E., Xu, T., Schuurmans, J. M., Huisman, J., & Visser, P. M. (2020). Suppressing Cyanobacteria with Hydrogen Peroxide Is More Effective at High Light Intensities. Toxins, 12(1), Article 18. https://doi.org/10.3390/toxins12010018 [details]
- Sandrini, G., Piel, T., Xu, T., White, E., Qin, H., Slot, P. C., Huisman, J., & Visser, P. M. (2020). Sensitivity to hydrogen peroxide of the bloom-forming cyanobacterium Microcystis PCC 7806 depends on nutrient availability. Harmful Algae, 99, Article 101916. https://doi.org/10.1016/j.hal.2020.101916 [details]
2019
- Burson, A., Stomp, M., Mekkes, L., & Huisman, J. (2019). Stable coexistence of equivalent nutrient competitors through niche differentiation in the light spectrum. Ecology, 100(12), Article e02873. https://doi.org/10.1002/ecy.2873 [details]
- Cavicchioli, R., Ripple, W. J., Timmis, K. N., Azam, F., Bakken, L. R., Baylis, M., Behrenfeld, M. J., Boetius, A., Boyd, P. W., Classen, A. T., Crowther, T. W., Danovaro, R., Foreman, C. M., Huisman, J., Hutchins, D. A., Jansson, J. K., Karl, D. M., Koskella, B., Mark Welch, D. B., ... Webster, N. S. (2019). Scientists’ warning to humanity: microorganisms and climate change. Nature Reviews Microbiology, 17(9), 569–586. https://doi.org/10.1038/s41579-019-0222-5 [details]
- Li, Q., Huisman, J., Bibby, T. S., & Jiao, N. (2019). Biogeography of Cyanobacterial isiA Genes and Their Link to Iron Availability in the Ocean. Frontiers in Microbiology, 10, Article 650. https://doi.org/10.3389/fmicb.2019.00650 [details]
- Luimstra, V. M., Schuurmans, J. M., de Carvalho, C. F. M., Matthijs, H. C. P., Hellingwerf, K. J., & Huisman, J. (2019). Exploring the low photosynthetic efficiency of cyanobacteria in blue light using a mutant lacking phycobilisomes. Photosynthesis Research, 141(3), 291–301. https://doi.org/10.1007/s11120-019-00630-z [details]
2018
- Blauw, A. N., Benincà, E., Laane, R. W. P. M., Greenwood, N., & Huisman, J. (2018). Predictability and environmental drivers of chlorophyll fluctuations vary across different time scales and regions of the North Sea. Progress in Oceanography, 161, 1-18. https://doi.org/10.1016/j.pocean.2018.01.005 [details]
- Branco, P., Egas, M., Elser, J. J., & Huisman, J. (2018). Eco-Evolutionary Dynamics of Ecological Stoichiometry in Plankton Communities. American Naturalist, 192(1), E1-E20. https://doi.org/10.1086/697472 [details]
- Burson, A., Stomp, M., Greenwell, E., Grosse, J., & Huisman, J. (2018). Competition for nutrients and light: testing advances in resource competition with a natural phytoplankton community. Ecology, 99(5), 1108-1118. https://doi.org/10.1002/ecy.2187 [details]
- Diao, M., Huisman, J., & Muyzer, G. (2018). Spatio-temporal dynamics of sulfur bacteria during oxic-anoxic regime shifts in a seasonally stratified lake. FEMS Microbiology Ecology, 94(4), Article fiy040. https://doi.org/10.1093/femsec/fiy040 [details]
- Huisman, J., Codd, G. A., Paerl, H. W., Ibelings, B. W., Verspagen, J. M. H., & Visser, P. M. (2018). Cyanobacterial blooms. Nature Reviews Microbiology, 16, 471-483. https://doi.org/10.1038/s41579-018-0040-1 [details]
- Linden, B., Huisman, J., & Rinkevich, B. (2018). Circatrigintan instead of lunar periodicity of larval release in a brooding coral species. Scientific Reports, 8, Article 5668. https://doi.org/10.1038/s41598-018-23274-w [details]
- Luimstra, V. M., Schuurmans, J. M., Verschoor, A. M., Hellingwerf, K. J., Huisman, J., & Matthijs, H. C. P. (2018). Blue light reduces photosynthetic efficiency of cyanobacteria through an imbalance between photosystems I and II. Photosynthesis Research, 138(2), 177-189. https://doi.org/10.1007/s11120-018-0561-5 [details]
- Massoud, E. C., Huisman, J., Benincà, E., Dietze, M. C., Bouten, W., & Vrugt, J. A. (2018). Probing the limits of predictability: data assimilation of chaotic dynamics in complex food webs. Ecology Letters, 21(1), 93-103. Advance online publication. https://doi.org/10.1111/ele.12876 [details]
- Schuurmans, J. M., Brinkmann, B. W., Makower, A. K., Dittmann, E., Huisman, J., & Matthijs, H. C. P. (2018). Microcystin interferes with defense against high oxidative stress in harmful cyanobacteria. Harmful Algae, 78, 47-55. https://doi.org/10.1016/j.hal.2018.07.008 [details]
2017
- Burridge, A. K., Goetze, E., Wall-Palmer, D., Le Double, S. L., Huisman, J., & Peijnenburg, K. T. C. A. (2017). Diversity and abundance of pteropods and heteropods along a latitudinal gradient across the Atlantic Ocean. Progress in Oceanography, 158, 213-223. Advance online publication. https://doi.org/10.1016/j.pocean.2016.10.001 [details]
- Bush, T., Diao, M., Allen, R. J., Sinnige, R., Muijzer, G., & Huisman, J. (2017). Oxic-anoxic regime shifts mediated by feedbacks between biogeochemical processes and microbial community dynamics. Nature Communications, 8, Article 789. https://doi.org/10.1038/s41467-017-00912-x [details]
- Chamberland, V. F., Latijnhouwers, K. R. W., Huisman, J., Hartmann, A. C., & Vermeij, M. J. A. (2017). Costs and benefits of maternally inherited algal symbionts in coral larvae. Proceedings of the Royal Society B-Biological Sciences, 284(1857), Article 0852. https://doi.org/10.1098/rspb.2017.0852 [details]
- Diao, M., Sinnige, R., Kalbitz, K., Huisman, J., & Muyzer, G. (2017). Succession of Bacterial Communities in a Seasonally Stratified Lake with an Anoxic and Sulfidic Hypolimnion. Frontiers in Microbiology, 8, Article 2511. https://doi.org/10.3389/fmicb.2017.02511 [details]
- Grosse, J., Burson, A., Stomp, M., Huisman, J., & Boschker, H. T. S. (2017). From Ecological Stoichiometry to Biochemical Composition: Variation in N and P Supply Alters Key Biosynthetic Rates in Marine Phytoplankton. Frontiers in Microbiology, 8, Article 1299. https://doi.org/10.3389/fmicb.2017.01299 [details]
- Huisman, J., Visser, P., & Schuurmans, M. (2017). Hans C.P. Matthijs (1951-2016): a passion for light and life. In R. Kurmayer, K. Sivonen, A. Wilmotte, & N. Salmaso (Eds.), Molecular Tools for the Detection and Quantification of Toxigenic Cyanobacteria (pp. v-vi). Wiley. https://doi.org/10.1002/9781119332169.fmatter [details]
- Ji, X., Verspagen, J. M. H., Stomp, M., & Huisman, J. (2017). Competition between cyanobacteria and green algae at low versus elevated CO2: who will win, and why? Journal of Experimental Botany, 68(14), 3815–3828. https://doi.org/10.1093/jxb/erx027 [details]
- Visser, F., Kok, A. C. M., Oudejans, M. G., Scott-Hayward, L. A. S., DeRuiter, S. L., Alves, A. C., Antunes, R. N., Isojunno, S., Pierce, G. J., Slabbekoorn, H., Huisman, J., & Miller, P. J. O. (2017). Vocal foragers and silent crowds: context-dependent vocal variation in Northeast Atlantic long-finned pilot whales. Behavioral Ecology and Sociobiology, 71(12), Article 170. https://doi.org/10.1007/s00265-017-2397-y [details]
2016
- Burson, A., Stomp, M., Akil, L., Brussaard, C. P. D., & Huisman, J. (2016). Unbalanced reduction of nutrient loads has created an offshore gradient from phosphorus to nitrogen limitation in the North Sea. Limnology and Oceanography, 61(3), 869-888. https://doi.org/10.1002/lno.10257 [details]
- Mojica, K. D. A., Huisman, J., Wilhelm, S. W., & Brussaard, C. P. D. (2016). Latitudinal variation in virus-induced mortality of phytoplankton across the North Atlantic Ocean. The ISME Journal, 10(2), 500-513. Advance online publication. https://doi.org/10.1038/ismej.2015.130 [details]
- Sandrini, G., Ji, X., Verspagen, J. M. H., Tann, R. P., Slot, P. C., Luimstra, V. M., Schuurmans, J. M., Matthijs, H. C. P., & Huisman, J. (2016). Rapid adaptation of harmful cyanobacteria to rising CO2. Proceedings of the National Academy of Sciences of the United States of America, 113(33), 9315-9320. https://doi.org/10.1073/pnas.1602435113 [details]
- Sandrini, G., Tann, R. P., Schuurmans, J. M., van Beusekom, S. A. M., Matthijs, H. C. P., & Huisman, J. (2016). Diel Variation in Gene Expression of the CO2-Concentrating Mechanism during a Harmful Cyanobacterial Bloom. Frontiers in Microbiology, 7, Article 551. https://doi.org/10.3389/fmicb.2016.00551 [details]
- Visser, P. M., Ibelings, B. W., Bormans, M., & Huisman, J. (2016). Artificial mixing to control cyanobacterial blooms: a review. Aquatic Ecology, 50(3), 423-441. https://doi.org/10.1007/s10452-015-9537-0 [details]
- Visser, P. M., Verspagen, J. M. H., Sandrini, G., Stal, L. J., Matthijs, H. C. P., Davis, T. W., Paerl, H. W., & Huisman, J. (2016). How rising CO2 and global warming may stimulate harmful cyanobacterial blooms. Harmful Algae, 54, 145-159. https://doi.org/10.1016/j.hal.2015.12.006 [details]
- Widder, S., Allen, R. J., Pfeiffer, T., Curtis, T. P., Wiuf, C., Sloan, W. T., Cordero, O. X., Brown, S. P., Momeni, B., Shou, W., Kettle, H., Flint, H. J., Haas, A. F., Laroche, B., Kreft, J. U., Rainey, P. B., Freilich, S., Schuster, S., Milferstedt, K., ... Soyer, O. S. (2016). Challenges in microbial ecology: building predictive understanding of community function and dynamics. The ISME Journal, 10, 2557-2568. https://doi.org/10.1038/ismej.2016.45 [details]
- den Haan, J., Huisman, J., Brocke, H. J., Goehlich, H., Latijnhouwers, K. R. W., van Heeringen, S., Honcoop, S. A. S., Bleyenberg, T. E., Schouten, S., Cerli, C., Hoitinga, L., Vermeij, M. J. A., & Visser, P. M. (2016). Nitrogen and phosphorus uptake rates of different species from a coral reef community after a nutrient pulse. Scientific Reports, 6, Article 28821. https://doi.org/10.1038/srep28821 [details]
2015
- Beninca, E., Ballantine, B., Ellner, S. P., & Huisman, J. (2015). Species fluctuations sustained by a cyclic succession at the edge of chaos. Proceedings of the National Academy of Sciences of the United States of America, 112(20), 6389-6394. https://doi.org/10.1073/pnas.1421968112 [details]
- Brauer, V. S., Stomp, M., Bouvier, T., Fouilland, E., Leboulanger, C., Confurius-Guns, V., Weissing, F. J., Stal, L. J., & Huisman, J. (2015). Competition and facilitation between the marine nitrogen-fixing cyanobacterium Cyanothece and its associated bacterial community. Frontiers in Microbiology, 5, Article 795. https://doi.org/10.3389/fmicb.2014.00795 [details]
- Burridge, A. K., Goetze, E., Raes, N., Huisman, J., & Peijnenburg, K. T. C. A. (2015). Global biogeography and evolution of Cuvierina pteropods. BMC Evolutionary Biology, 15, Article 39. https://doi.org/10.1186/s12862-015-0310-8 [details]
- Mojica, K. D. A., van de Poll, W. H., Kehoe, M. J., Huisman, J., Timmermans, K. R., Buma, A. G. J., van der Woerd, H. J., Hahn-Woernle, L., Dijkstra, H. A., & Brussaard, C. P. D. (2015). Phytoplankton community structure in relation to vertical stratification along a north-south gradient in the Northeast Atlantic Ocean. Limnology and Oceanography, 60(5), 1498-1521. https://doi.org/10.1002/lno.10113 [details]
- Sandrini, G., Cunsolo, S., Schuurmans, J. M., Matthijs, H. C. P., & Huisman, J. (2015). Changes in gene expression, cell physiology and toxicity of the harmful cyanobacterium Microcystis aeruginosa at elevated CO2. Frontiers in Microbiology, 6, Article 401. https://doi.org/10.3389/fmicb.2015.00401 [details]
- Sandrini, G., Huisman, J., & Matthijs, H. C. P. (2015). Potassium sensitivity differs among strains of the harmful cyanobacterium Microcystis and correlates with the presence of salt tolerance genes. FEMS Microbiology Letters, 362(16), Article fnv121. https://doi.org/10.1093/femsle/fnv121 [details]
- Sandrini, G., Jakupovic, D., Matthijs, H. C. P., & Huisman, J. (2015). Strains of the Harmful Cyanobacterium Microcystis aeruginosa Differ in Gene Expression and Activity of Inorganic Carbon Uptake Systems at Elevated CO2 Levels. Applied and Environmental Microbiology, 81(22), 7730-7739. https://doi.org/10.1128/AEM.02295-15 [details]
2014
- Burson, A., Matthijs, H. C. P., de Bruijne, W., Talens, R., Hoogenboom, R., Gerssen, A., Visser, P. M., Stomp, M., Steur, K., van Scheppingen, Y., & Huisman, J. (2014). Termination of a toxic Alexandrium bloom with hydrogen peroxide. Harmful Algae, 31, 125-135. https://doi.org/10.1016/j.hal.2013.10.017 [details]
- Liu, Q-X., Herman, P. M. J., Mooij, W. M., Huisman, J., Scheffer, M., Olff, H., & van de Koppel, J. (2014). Pattern formation at multiple spatial scales drives the resilience of mussel bed ecosystems. Nature Communications, 5, 5234. https://doi.org/10.1038/ncomms6234 [details]
- Rabouille, S., van de Waal, D. B., Matthijs, H. C. P., & Huisman, J. (2014). Nitrogen fixation and respiratory electron transport in the cyanobacterium Cyanothece under different light/dark cycles. FEMS Microbiology Ecology, 87(3), 630-638. https://doi.org/10.1111/1574-6941.12251 [details]
- Sandrini, G., Matthijs, H. C. P., Verspagen, J. M. H., Muyzer, G., & Huisman, J. (2014). Genetic diversity of inorganic carbon uptake systems causes variation in CO2 response of the cyanobacterium Microcystis. The ISME Journal, 8, 589-600. https://doi.org/10.1038/ismej.2013.179 [details]
- Verspagen, J. M. H., van de Waal, D. B., Finke, J. F., Visser, P. M., & Huisman, J. (2014). Contrasting effects of rising CO2 on primary production and ecological stoichiometry at different nutrient levels. Ecology Letters, 17(8), 951-960. https://doi.org/10.1111/ele.12298 [details]
- Verspagen, J. M. H., van de Waal, D. B., Finke, J. F., Visser, P. M., van Donk, E., & Huisman, J. (2014). Rising CO2 levels will intensify phytoplankton blooms in eutrophic and hypertrophic lakes. PLoS ONE, 9(8), Article e104325. https://doi.org/10.1371/journal.pone.0104325 [details]
- Visser, F., Miller, P. J. O., Antunes, R. N., Oudejans, M. G., MacKenzie, M. L., Aoki, K., Lam, F. P. A., Kvadsheim, P. H., Huisman, J., & Tyack, P. L. (2014). The social context of individual foraging behaviour in long-finned pilot whales (Globicephala melas). Behaviour, 151(10), 1453-1477. https://doi.org/10.1163/1568539X-00003195 [details]
- Wilken, S., Verspagen, J. M. H., Naus-Wiezer, S., van Donk, E., & Huisman, J. (2014). Biological control of toxic cyanobacteria by mixotrophic predators: an experimental test of intraguild predation theory. Ecological Applications, 24(5), 1235-1249. https://doi.org/10.1890/13-0218.1 [details]
- Wilken, S., Verspagen, J. M. H., Naus-Wiezer, S., van Donk, E., & Huisman, J. (2014). Comparison of predator-prey interactions with and without intraguild predation by manipulation of the nitrogen source. Oikos, 123(4), 423-432. https://doi.org/10.1111/j.1600-0706.2013.00736.x [details]
- den Haan, J., Visser, P. M., Ganase, A. E., Gooren, E. E., Stal, L. J., van Duyl, F. C., Vermeij, M. J. A., & Huisman, J. (2014). Nitrogen fixation rates in algal turf communities of a degraded versus less degraded coral reef. Coral reefs, 33(4), 1003-1015. https://doi.org/10.1007/s00338-014-1207-5 [details]
2013
- Brauer, V. S., Stomp, M., Rosso, C., van Beusekom, S. A. M., Emmerich, B., Stal, L. J., & Huisman, J. (2013). Low temperature delays timing and enhances the cost of nitrogen fixation in the unicellular cyanobacterium Cyanothece. The ISME Journal, 7, 2105-2115. Advance online publication. https://doi.org/10.1038/ismej.2013.103 [details]
- Verschoor, A. M., van Dijk, M. A., Huisman, J., & van Donk, E. (2013). Elevated CO2 concentrations affect the elemental stoichiometry and species composition of an experimental phytoplankton community. Freshwater Biology, 58(3), 597-611. https://doi.org/10.1111/j.1365-2427.2012.02833.x [details]
- Wilken, S., Huisman, J., Naus-Wiezer, S., & Van Donk, E. (2013). Mixotrophic organisms become more heterotrophic with rising temperature. Ecology Letters, 16(2), 225-233. https://doi.org/10.1111/ele.12033 [details]
- den Haan, J., Huisman, J., Dekker, F., ten Brinke, J. L., Ford, A. K., van Ooijen, J., van Duyl, F. C., Vermeij, M. J. A., & Visser, P. M. (2013). Fast detection of nutrient limitation in macroalgae and seagrass with nutrient-induced fluorescence. PLoS ONE, 8(7), e68834. https://doi.org/10.1371/journal.pone.0068834 [details]
2012
- Blauw, A. N., Beninca, E., Laane, R. W. P. M., Greenwood, N., & Huisman, J. (2012). Dancing with the tides: fluctuations of coastal phytoplankton orchestrated by different oscillatory modes of the tidal cycle. PLoS ONE, 7(11), Article e49319. https://doi.org/10.1371/journal.pone.0049319 [details]
- Brauer, V. S., Stomp, M., & Huisman, J. (2012). The nutrient-load hypothesis: patterns of resource limitation and community structure driven by competition for nutrients and light. American Naturalist, 179(6), 721-740. https://doi.org/10.1086/665650 [details]
- Krasikov, V., Aguirre von Wobeser, E., Dekker, H. L., Huisman, J., & Matthijs, H. C. P. (2012). Time-series resolution of gradual nitrogen starvation and its impact on photosynthesis in the cyanobacterium Synechocystis PCC 6803. Physiologia Plantarum, 145(3), 426-439. https://doi.org/10.1111/j.1399-3054.2012.01585.x [details]
- Matthijs, H. C. P., Visser, P. M., Reeze, B., Meeuse, J., Slot, P. C., Wijn, G., Talens, R., & Huisman, J. (2012). Selective suppression of harmful cyanobacteria in an entire lake with hydrogen peroxide. Water Research, 46(5), 1460-1472. https://doi.org/10.1016/j.watres.2011.11.016 [details]
2011
- Aguirre von Wobeser, E., Ibelings, B. W., Bok, J., Krasikov, V., Huisman, J., & Matthijs, H. C. P. (2011). Concerted changes in gene expression and cell physiology of the cyanobacterium Synechocystis sp. strain PCC 6803 during transitions between nitrogen and light-limited growth. Plant Physiology, 155(3), 1445-1457. https://doi.org/10.1104/pp.110.165837 [details]
- Benincà, E., Dakos, V., van Nes, E. H., Huisman, J., & Scheffer, M. (2011). Resonance of plankton communities with temperature fluctuations. American Naturalist, 178(4), E85-E95. https://doi.org/10.1086/661902 [details]
- Gerla, D. J., Mooij, W. M., & Huisman, J. (2011). Photoinhibition and the assembly of light-limited phytoplankton communities. Oikos, 120(3), 359-368. https://doi.org/10.1111/j.1600-0706.2010.18573.x [details]
- Stomp, M., Huisman, J., Mittelbach, G. G., Litchman, E., & Klausmeier, C. A. (2011). Large-scale biodiversity patterns in freshwater phytoplankton. Ecology, 92(11), 2096-2107. https://doi.org/10.1890/10-1023.1 [details]
- Visser, F., Hartman, K. L., Pierce, G. J., Valavanis, V. D., & Huisman, J. (2011). Timing of migratory baleen whales at the Azores in relation to the North Atlantic spring bloom. Marine Ecology - Progress Series, 440, 267-279. https://doi.org/10.3354/meps09349 [details]
- Visser, F., Hartman, K. L., Rood, E. J. J., Hendriks, A. J. E., Zult, D. B., Wolff, W. J., Huisman, J., & Pierce, G. J. (2011). Risso’s dolphins alter daily resting pattern in response to whale watching at the Azores. Marine Mammal Science, 27(2), 366-381. https://doi.org/10.1111/j.1748-7692.2010.00398.x [details]
- van de Waal, D. B., Verspagen, J. M. H., Finke, J. F., Vournazou, V., Immers, A. K., Kardinaal, W. E. A., Tonk, L., Becker, S., van Donk, E., Visser, P. M., & Huisman, J. (2011). Reversal in competitive dominance of a toxic versus non-toxic cyanobacterium in response to rising CO2. The ISME Journal, 5(9), 1438-1450. https://doi.org/10.1038/ismej.2011.28 [details]
2010
- Blauw, A. N., Los, F. J., Huisman, J., & Peperzak, L. (2010). Nuisance foam events and Phaeocystis globosa blooms in Dutch coastal waters analyzed with fuzzy logic. Journal of Marine Systems, 83(3-4), 115-126. https://doi.org/10.1016/j.jmarsys.2010.05.003 [details]
- Branco, P., Stomp, M., Egas, M., & Huisman, J. (2010). Evolution of nutrient uptake reveals a trade-off in the ecological stoichiometry of plant-herbivore interactions. American Naturalist, 176(6), E162-E176. https://doi.org/10.1086/657036 [details]
- Huisman, J. (2010). Comment on "Patterns of diversity in marine phytoplankton". Science, 329(5991), 512-512. https://doi.org/10.1126/science.1189880 [details]
- Wilken, S., Wiezer, S., Huisman, J., & van Donk, E. (2010). Microcystins do not provide anti-herbivore defence against mixotrophic flagellates. Aquatic Microbial Ecology, 59(3), 207-216. https://doi.org/10.3354/ame01395 [details]
- van de Waal, D. B., Ferreruela, G., Tonk, L., van Donk, E., Huisman, J., Visser, P. M., & Matthijs, H. C. P. (2010). Pulsed nitrogen supply induces dynamic changes in the amino acid composition and microcystin production of the harmful cyanobacterium Planktothrix agardhii. FEMS Microbiology Ecology, 74(2), 430-438. https://doi.org/10.1111/j.1574-6941.2010.00958.x [details]
- van de Waal, D. B., Verschoor, A. M., Verspagen, J. M. H., van Donk, E., & Huisman, J. (2010). Climate-driven changes in the ecological stoichiometry of aquatic ecosystems. Frontiers in Ecology and the Environment, 8(3), 145-152. https://doi.org/10.1890/080178 [details]
2009
- Acinas, S. G., Haverkamp, T. H. A., Huisman, J., & Stal, L. J. (2009). Phenotypic and genetic diversification of Pseudanabaena spp. (cyanobacteria). The ISME Journal, 3(1), 31-46. https://doi.org/10.1038/ismej.2008.78 [details]
- Beninca, E., Jöhnk, K., Heerkloss, R., & Huisman, J. (2009). Coupled predator-prey oscillations in a chaotic food web. Ecology Letters, 12(12), 1367-1378. https://doi.org/10.1111/j.1461-0248.2009.01391.x [details]
- Dakos, V., Benincà, E., van Nes, E. H., Philippart, C. J. M., Scheffer, M., & Huisman, J. (2009). Interannual variability in species composition explained as seasonally entrained chaos. Proceedings of the Royal Society B-Biological Sciences, 276(1669), 2871-2880. https://doi.org/10.1098/rspb.2009.0584 [details]
- Haverkamp, T. H. A., Schouten, D., Doeleman, M., Wollenzien, U., Huisman, J., & Stal, L. J. (2009). Colorful microdiversity of Synechococcus strains (picocyanobacteria) isolated from the Baltic Sea. The ISME Journal, 3(4), 397-408. https://doi.org/10.1038/ismej.2008.118 [details]
- Paerl, H. W., & Huisman, J. (2009). Climate change: A catalyst for global expansion of harmful cyanobacterial blooms. Environmental Microbiology Reports, 1(1), 27-37. https://doi.org/10.1111/j.1758-2229.2008.00004.x [details]
- Tonk, L., Welker, M., Huisman, J., & Visser, P. M. (2009). Production of cyanopeptolins, anabaenopeptins, and microcystins by the harmful cyanobacteria Anabaena 90 and Microcystis PCC 7806. Harmful Algae, 8(2), 219-224. https://doi.org/10.1016/j.hal.2008.05.005 [details]
- van de Waal, D. B., Verspagen, J. M. H., Lürling, M., van Donk, E., Visser, P. M., & Huisman, J. (2009). The ecological stoichiometry of toxins produced by harmful cyanobacteria: An experimental test of the carbon-nutrient balance hypothesis. Ecology Letters, 12(12), 1326-1335. https://doi.org/10.1111/j.1461-0248.2009.01383.x [details]
2008
- Atamna-Ismaeel, N., Sabehi, G., Sharon, I., Witzel, K. P., Labrenz, M., Jürgens, K., Barkay, T., Stomp, M., Huisman, J., & Beja, O. (2008). Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems. The ISME Journal, 2, 656-662. https://doi.org/10.1038/ismej.2008.27 [details]
- Benincà, E., Huisman, J., Heerkloss, R., Jöhnk, K. D., Branco, P., van Nes, E. H., Scheffer, M., & Ellner, S. P. (2008). Chaos in a long-term experiment with a plankton community. Nature, 451(7180), 822-825. https://doi.org/10.1038/nature06512 [details]
- Haverkamp, T., Acinas, S. G., Doeleman, M., Stomp, M., Huisman, J., & Stal, L. J. (2008). Diversity and phylogeny of Baltic Sea picocyanobacteria inferred from their ITS and phycobiliprotein operons. Environmental Microbiology, 10(1), 174-188. https://doi.org/10.1111/j.1462-2920.2007.01442.x [details]
- Jöhnk, K. D., Huisman, J., Sharples, J., Sommeijer, B., Visser, P. M., & Stroom, J. M. (2008). Summer heatwaves promote blooms of harmful cyanobacteria. Global Change Biology, 14, 495-512. https://doi.org/10.1111/j.1365-2486.2007.01510.x [details]
- Paerl, H. W., & Huisman, J. (2008). Blooms like it hot. Science, 320, 57-58. https://doi.org/10.1126/science.1155398 [details]
- Passarge, J., & Huisman, J. (2008). Microbial communities. In S. E. Jørgensen, & B. D. Fath (Eds.), Encyclopedia of ecology (pp. 2328-2334). Elsevier. https://doi.org/10.1016/B978-008045405-4.00652-2 [details]
- Stomp, M., van Dijk, M. A., van Overzee, H. M. J., Wortel, M. T., Sigon, C. A. M., Egas, M., Hoogveld, H., Gons, H. J., & Huisman, J. (2008). The timescale of phenotypic plasticity and its impact on competition in fluctuating environments. American Naturalist, 172(5), E169-E185. https://doi.org/10.1086/591680 [details]
- Tonk, L., van de Waal, D. B., Slot, P., Huisman, J., Matthijs, H. C. P., & Visser, P. M. (2008). Amino acid availability determines the ratio of microcystin variants in the cyanobacterium Planktothrix agardhii. FEMS Microbiology Ecology, 65(3), 383-390. https://doi.org/10.1111/j.1574-6941.2008.00541.x [details]
2007
- Agawin, N. S., Rabouille, S., Veldhuis, M., Servatius, L., Hol, S., van Overzee, H. M. J., & Huisman, J. (2007). Competition and facilitation between unicellular nitrogen-fixing cyanobacteria and non-nitrogen-fixing phytoplankton species. Limnology and Oceanography, 52(5), 2233-2248. https://doi.org/10.4319/lo.2007.52.5.2233 [details]
- De Senerpont Domis, L. N., Mooij, W. M., & Huisman, J. (2007). Climate-induced shifts in an experimental phytoplankton community: a mechanistic approach. Hydrobiologia, 584(1), 403-413. https://doi.org/10.1007/s10750-007-0609-6 [details]
- Kardinaal, W. E. A., Janse, I., Kamst-van Agterveld, M., Meima, M., Snoek, J., Mur, L. R., Huisman, J., Zwart, G., & Visser, P. M. (2007). Microcystis genotype succession in relation to microcystin concentrations in freshwater lakes. Aquatic Microbial Ecology, 48(1), 1-12. https://doi.org/10.3354/ame048001 [details]
- Kardinaal, W. E. A., Tonk, L., Janse, I., Hol, S., Slot, P., Huisman, J., & Visser, P. M. (2007). Competition for Light between Toxic and Nontoxic Strains of the Harmful Cyanobacterium Microcystis. Applied and Environmental Microbiology, 73(9), 2939-2946. https://doi.org/10.1128/AEM.02892-06 [details]
- Stomp, M., Huisman, J., Pick, F. R., Laamanen, M., Haverkamp, T. H. A., & Stal, L. J. (2007). Colourful coexistence of red and green picocyanobacteria in lakes and seas. Ecology Letters, 10, 290-298. https://doi.org/10.1111/j.1461-0248.2007.01026.x [details]
- Stomp, M., Huisman, J., Stal, L. J., & Matthijs, H. C. P. (2007). Colorful niches of phototrophic microorganisms shaped by vibrations of the water molecule. The ISME Journal, 1, 271-282. https://doi.org/10.1038/ismej.2007.59 [details]
- Tonk, L., Bosch, K., Visser, P. M., & Huisman, J. (2007). Salt tolerance of the harmful cyanobacterium Microcystis aeruginosa. Aquatic Microbial Ecology, 46, 117-123. https://doi.org/10.3354/ame046117 [details]
- Wilson, J. B., Spijkerman, E., & Huisman, J. (2007). Is There Really Insufficient Support for Tilman's R* Concept? A comment on Miller et al. American Naturalist, 169(5), 700-706. https://doi.org/10.1086/513113 [details]
2006
- Huisman, J., Pham Thi, N. N., Karl, D. M., & Sommeijer, B. (2006). Reduced mixing generates oscillations and chaos in the oceanic deep chlorophyll maximum. Nature, 439(19), 322-325. https://doi.org/10.1038/nature04245 [details]
- Passarge, J., Hol, S., Escher, M., & Huisman, J. (2006). Competition for nutrients and light: Stable coexistence, alternative stable states or competitive exclusion? Ecological Monographs, 76(1), 57-72. https://doi.org/10.1890/04-1824 [details]
- Verspagen, J. M. H., Passarge, J., Jöhnk, K., Visser, P. M., Peperzak, L., Boers, P., Laanbroek, H. J., & Huisman, J. (2006). Water management strategies against toxic Microcystis blooms in the Dutch delta. Ecological Applications, 16(1), 313-327. https://doi.org/10.1890/04-1953 [details]
- Verspagen, J. M. H., Visser, P. M., & Huisman, J. (2006). Aggregation with clay causes sedimentation of the buoyant cyanobacteria Microcystis spp. Aquatic Microbial Ecology, 44(1), 165-174. https://doi.org/10.3354/ame044165 [details]
2005
- Huisman, J., & Hulot, F. (2005). Population dynamics of harmful cyanobacteria: factors affecting species composition. In J. Huisman, H. C. P. Matthijs, & P. M. Visser (Eds.), Harmful Cyanobacteria (pp. 143-176). (Aquatic Ecology Series). Springer. [details]
- Huisman, J., Matthijs, H. C. P., & Visser, P. M. (2005). Harmful Cyanobacteria. (Aquatic Ecology Series). Springer. [details]
- Irigoien, X., Huisman, J., & Harris, R. P. (2005). Different measures of biodiversity.- reply. Nature, 433, E9. [details]
- Pham Thi, N. N., Huisman, J., & Sommeijer, B. P. (2005). Simulation of three-dimensional phytoplankton dynamics: competition in light-limited environments. Journal of Computational and Applied Mathematics, 174(1), 57-77. https://doi.org/10.1016/j.cam.2004.03.023 [details]
- Tonk, L., Visser, P. M., Christiansen, G., Dittmann, E., Snelder, E. O. F. M., Wiedner, C., Mur, L. R., & Huisman, J. (2005). The microcystin composition of the cyanobacterium Planktothrix agardhii changes toward a more toxic variant with increasing light intensity. Applied and Environmental Microbiology, 71(9), 5177-5181. https://doi.org/10.1128/AEM.71.9.5177-5181.2005 [details]
- Verspagen, J. M. H., Snelder, E. O. F. M., Visser, P. M., Jöhnk, K., Ibelings, B. W., Mur, L. R., & Huisman, J. (2005). Benthic-pelagic coupling in the population dynamics of the harmful cyanobacterium Microcystis. Freshwater Biology, 50, 854-867. https://doi.org/10.1111/j.1365-2427.2005.01368.x [details]
2004
- Huisman, J., Sharples, J., Stroom, J. M., Visser, P. M., Kardinaal, W. E. A., Verspagen, J. M. H., & Sommeijer, B. (2004). Changes in turbulent mixing shift competition for light between phytoplankton species. Ecology, 85(11), 2960-2970. https://doi.org/10.1890/03-0763 [details]
- Hulot, F. D., & Huisman, J. (2004). Allelopathic interactions between phytoplankton species: the roles of heterotrophic bacteria and mixing intensity. Limnology and Oceanography, 49(4, pt. 2), 1424-1434. https://doi.org/10.4319/lo.2004.49.4_part_2.1424 [details]
- Irigoien, X., Huisman, J., & Harris, R. P. (2004). Global biodiversity patterns of marine phytoplankton and zooplankton. Nature, 429(6994), 863-867. https://doi.org/10.1038/nature02593 [details]
- Kuang, Y., Huisman, J., & Elser, J. J. (2004). Stoichiometric plant-herbivore models and their interpretation. Mathematical Biosciences and Engineering, 1(2), 215-222. http://math.asu.edu/~mbe [details]
- Stomp, M., Huisman, J., de Jongh, F., Veraart, A. J., Gerla, D., Rijkeboer, M., Ibelings, B. W., Wollenzien, U. I. A., & Stal, L. J. (2004). Adaptive divergence in pigment composition promotes phytoplankton biodiversity. Nature, 432, 104-107. https://doi.org/10.1038/nature03044 [details]
- Verspagen, J. M. H., Snelder, E. O. F. M., Visser, P. M., Huisman, J., Mur, L. R., & Ibelings, B. W. (2004). Recruitment of benthic Microcystis (Cyanophyceae) to the water column: internal buoyancy changes or resuspension? Journal of phycology, 40, 260-270. https://doi.org/10.1111/j.1529-8817.2004.03174.x [details]
2022
- Huisman, J., Dittmann, E., Fastner, J., Schuurmans, J. M., Scott, J. T., Van de Waal, D. B., Visser, P. M., Welker, M., & Chorus, I. (2022). Comment on “Models predict planned phosphorus load reduction will make Lake Erie more toxic”. Science, 378(6620), Article eadd9959. https://doi.org/10.1126/science.add9959 [details]
2021
- Branco, P., Egas, M., Elser, J. J., & Huisman, J. (2021). Correction to: Eco-evolutionary dynamics of ecological stoichiometry in plankton communities” (American Naturalist 192: E1–E20). American Naturalist, 197(4). Advance online publication. https://doi.org/10.1086/713285
2016
- Huisman, J., & Visser, P. M. (2016). Licht en leven was zijn passie. BioNieuws, 26, 13. http://archief.bionieuws.nl/ [details]
2007
- Visser, P. M., Kardinaal, W. E. A., Tonk, L., Janse, I., Hol, S., Slot, P. C., & Huisman, J. (2007). Competition for light between toxic and non-toxic strains of the harmful cyanobacterium Microcystis. In Abstract book (pp. 34). [details]
2006
- Aguirre von Wobeser, E., Krasikov, V., Eisenhut, M., Hagemann, M., Ibelings, B. W., Huisman, J., & Matthijs, H. C. P. (2006). Differences and similarities of transcription responses of Synechocystis to various environmental stresses. In Abstracts 12th international symposium of photosynthetic prokaryotes (pp. 110). Pau, France. [details]
- Beninca, E., Jöhnk, K., Heerkloss, R., Scheffer, M., & Huisman, J. (2006). Time series analysis of plankton community dynamics in a long-term mesocosm study. In ASLO Abstract book summer meeting (pp. 11). Victoria, Canada. [details]
- Huisman, J., Pham Thi, N. N., Karl, D. M., & Sommeijer, B. (2006). Reduced mixing generates oscillations and chaos in the oceanic deep chlorophyll maximum. In ASLO Abstract book summer meeting (pp. 56). Victoria, Canada. [details]
- Jöhnk, K., Huisman, J., Sharples, J., Sommeijer, B. P., Visser, P. M., & Stroom, J. (2006). Summer heatwaves promote blooms of harmful cyanobacteria. In ASLO Abstract book summer meeting (pp. 60). [details]
- Tonk, L., Visser, P. M., Welker, M., & Huisman, J. (2006). The cyanotoxin production of microcystis and anabaena show a similar response to environmental factors. In ASLO Abstract book summer meeting (pp. 122). [details]
- van de Waal, D. B., Rabouille, S., & Huisman, J. (2006). Influence of the day-night cycle on nitrogen fixation by unicellular marine cyanobacteria. In ASLO Abstract book summer meeting (pp. 125). Victoria, Canada. [details]
2005
- Aguirre von Wobeser, E., Huisman, J., Ibelings, B. W., & Matthijs, H. C. P. (2005). Global gene expression analysis under salt stress using a newly designed long oligonucleotide microarray (Synechocystis PCC6803. In H. C. P. Matthijs, & A. Gwizdek-Wisniewska (Eds.), The 6th European Workshop on the Molecular Biology of Cyanobacteria (pp. 113). Gdansk: Fundacja Rozwoju Uniwersytetu Gdanskiego. [details]
- Aguirre von Wobeser, E., Huisman, J., Ibelings, B., & Matthijs, H. C. P. (2005). A newly designed 45 to 60 mer oligonucleotide Agilent platform microarray for global gene expression studies of Synechocystis PCC6803: example salt stress experiment. In H. C. P. Matthijs (Ed.), Genomics, Proteomics and Structure for Functional Understanding (pp. 70). UvA Amsterdam NL: ESF (European Science Foundation). [details]
- Aguirre von Wobeser, E., Krasikov, V., Huisman, J., Matthijs, H. C. P., & Ibelings, B. W. (2005). Physiological and gene expression changes of Synechocytis PCC6803 under nitrogen-limited growth in continuous culture. In H. C. P. Matthijs, & A. Gwizdek-Wisniewska (Eds.), The 6th European Workshop on the Molecular Biology of Cyanobacteria (pp. 69). Gdansk: Fundacja Rozwoju Uniwersytetu Gdanskiego. [details]
- Huisman, J., Matthijs, H. C. P., & Visser, P. M. (2005). Harmful cyanobacteria. (Aquatic Ecology Series). Springer. [details]
- Jöhnk, K., & Huisman, J. (2005). Meteorological and hydrodynamical forcing of plankton dynamics. In ASLO Abstract book summer meeting (pp. 75). Santiago de Compostela, Spain. [details]
- Krasikov, V., Aguirre von Wobeser, E., Dekker, H. L., Huisman, J., & Matthijs, H. C. P. (2005). Transcriptome versus proteomics: the response of Synechocystis sp. PCC6803 to nitrogen starvation. In H. C. P. Matthijs, & A. Gwizdek-Wisniewska (Eds.), The 6th European Workshop on the Molecular Biology of Cyanobacteria (pp. 118). Gdansk: Fundacja Rozwoju Uniwersytetu Gdanskiego. [details]
- Krasikov, V., Aguirre von Wobeser, E., Huisman, J., Ibelings, B. W., & Matthijs, H. C. P. (2005). Genome-wide responses of Synechocystis PCC6803 to nitrogen deprivation. In H. C. P. Matthijs, & A. Gwizdek-Wisniewska (Eds.), The 6th European Workshop on the Molecular Biology of Cyanobacteria (pp. 71). Gdansk: Fundacja Rozwoju Uniwersytetu Gdanskiego. [details]
- Krasikov, V., Aguirre von Wobeser, E., Huisman, J., Ibelings, B., & Matthijs, H. C. P. (2005). Genome-wide responses of Synechocystis PCC6803 to nitrogen deprivation. In H. C. P. Matthijs (Ed.), Genomics, Proteomics and Structure for Functional Understanding (pp. 72). UvA Amsterdam The Netherlands: ESF (European Science Foundation). [details]
- Krasikov, V., Aguirre von Wobeser, E., Yeremenko, N., Dekker, H. L., Huisman, J., & Matthijs, H. C. P. (2005). The response of synechocystis sp. pcc 6803 to nitrogen starvation: transcriptomics versus proteomics. In A. Van der Est, & D. Bruce (Eds.), Photosynthesis: Fundamental Aspects to Global Perspectives (pp. 1008-1010). Lawrence, Canada: Alliance Communications Group Publ.. [details]
- Verspagen, J. M. H., Boers, P., Laanbroek, H. L., & Huisman, J. (2005). Doorspoelen of opzouten? Bestrijding van blauwalgen in het Volkerak-Zoommeer. UvA, NIOO-KNAW; RIZA; Rijkswaterstaat Zeeland. [details]
2004
- Jöhnk, K., Straile, D., & Huisman, J. (2004). Lake stratification under climatic change. In Climate Change & Aquatic Systems - Past, Present, Future, Book of Abstracts (pp. 51). Plymouth, United Kingdom. [details]
- Kuang, Y., Huisman, J., & Elser, J. J. (2004). Stoichiometric plant-herbivore models and their interpretation. Mathematical Biosciences and Engineering, 1, 215-222. [details]
2020
- Burson, A., Stomp, M., Mekkes, L., & Huisman, J. (2020). Stable coexistence of equivalent nutrient competitors through niche differentiation in the light spectrum. Bulletin of the Ecological Society of America, 101(1), Article e01631. https://doi.org/10.1002/bes2.1631 [details]
2019
- Huisman, J. (2019). Interacties microben en klimaatverandering worden onderschat. BioNieuws, 29, 16-17. https://bionieuws.nl/article/334015/interacties_microben_en_klimaatverandering_worden_onderschat [details]
2013
- de Bruijne, W. J. J., Huisman, J., Matthijs, H., Burson, A., & Visser, P. M. (2013). Bestrijding van de dinoflagellaat Alexandrium ostenfeldii in de Ouwerkerkse Kreek met waterstofperoxide. Arcadis Nederland BV. [details]
- de Senerpont Domis, L., van Donk, E., Lürling, M., Huisman, J., & van Dam, H. (2013). Olivijn lost blauwalgenbloei niet op. H2O, 46(11), 15. https://issuu.com/h2o-magazine/docs/nov13 [details]
2009
- Huisman, J., & Rabouille, S. (2009). [Review of: T. Kiørboe (2008) A mechanistic approach to plankton ecology]. Limnology and Oceanography Bulletin, 18(2), 52-54. http://aslo.org/bulletin/issues/09_v18_i2.pdf [details]
2006
2004
- Huisman, J., & Jöhnk, K. (2004). Simulation of the population development of the toxic cyanobacterium Microcystis under proposed heated water inflow scenarios. Phase 3: calibration of the model. amsterdam: ibed.amb. [details]
- Huisman, J., & Jöhnk, K. (2004). Simulation of the population development of the toxic cyanobacterium Microcystis under proposed heated water inflow scenarios. Phase 4: simulations for confined heat input. amsterdam: IBED-AMB. [details]
- Huisman, J., Jöhnk, K., & Sommeijer, B. (2004). Simulation of the population development of the toxic cyanobacterium Microcystis in Lake Nieuwe Meer under proposed heated water inflow scenarios. Phase 2: A fully developed model of vertical turbulent diffusivity and various climate scenarios. amsterdam: ibed/amb. [details]
- Huisman, J., Jöhnk, K., & Sommeijer, B. P. (2004). Simulation of the population development of the toxic cyanobacterium Microcystis under proposed heated water inflow scenarios. Phase 2a: A fully developed model of vertical turbulent diffusivity and various climate scenarios - simulations for additional inflow scenarios. amsterdam: ibed/amb. [details]
- Huisman, J., Jöhnk, K., Sommeijer, B., Sharples, J., Visser, P. M., Stroom, J., de Jongh, F., Ross, O., Moore, M., Hove, L., & Schaub, B. (2004). Intermittent Mixing in Lake Nieuwe Meer. Field Experiment and Model Simulations 2003. ibed/amb. [details]
2014
- Huisman, J. (2014). De basis van de voedselketen. In N. van Straalen, H. Ridderinkhof, & R. Buiter (Eds.), Het Wilde Westen onder water: Oceanen (biowetenschappen en maatschappij kwartaal 2 2014). Den Haag: Stichting Biowetenschappen en Maatschappij.
2010
- Huisman, J., & Schilthuizen, M. (2010). Vinex-merel is andere vogel dan z’n voorvader. De Volkskrant.
2008
- Huisman, J. (2008). De zeespiegel stijgt, maar niet zó hard: Berekening Veerman is dubieus. NRC Handelsblad, 6-6. http://www.nrc.nl/achtergrond/article1976242.ece/De_zeespiegel_stijgt,_maar_niet_zo_hard
2007
2004
- Huisman, J., Snoek, J., & Weissing, F. J. (2004). Concurrentie leidt tot chaos?! In H. Heesterbeek, O. Diekmann, & H. Metz (Eds.), De wiskundige kat, de biologische muis en de jacht op inzicht (pp. 181-196). Utrecht: Epsilon Uitgaven. [details]
- Huisman, J., de Roos, A. M., & Luttikhuizen, P. C. (2004). Wadden. BioNieuws, 14(1), 2. [details]
2025
- Piel, T. F. (2025). Effects of hydrogen peroxide on cyanobacterial blooms. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
- Weenink, F. J. (2025). Controlling cyanobacterial blooms: How hydrogen peroxide treatments affect aquatic communities. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
2024
2023
- Holtrop, T. (2023). An Ocean of Colors.
- Kornder, N. A. (2023). Organic carbon cycling in a Caribbean coral reef: Hidden biomass, sneezing sponges, and net heterotrophy. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
2022
2021
- Linden, B. (2021). Innovative methods for the mass production of brooding coral via sexual propagation. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
- Mayer Branco, P. M. (2021). Ecological stoichiometry and the evolution of plankton communities. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
2020
- Ji, X. (2020). Living in a changing world: Rising CO2 and its impact on lake phytoplankton. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
- Luimstra, V. M. (2020). The bluest blues: Exploring the low photosynthetic efficiency of cyanobacteria in blue light. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
2018
- Burson, A. M. (2018). A sea of change: Impacts of reduced nitrogen and phosphorus loads on coastal phytoplankton communities. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
- Chamberland, V. F. (2018). Environmental drivers of recruitment success in Caribbean corals: Applications to aid the recovery of threatened coral populations. [Thesis, externally prepared, Universiteit van Amsterdam]. [details]
- Diao, M. (2018). Interactions between microorganisms and oxic-anoxic transitions. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
2017
2016
2015
- Blauw, A. N. (2015). Monitoring and prediction of phytoplankton dynamics in the North Sea. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
- Brauer, V. S. (2015). Growth and functioning of the microbial plankton community: effects of temperature, nutrients and light. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
- den Haan, J. (2015). Effects of nutrient enrichment on the primary producers of a degraded coral reef. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
2014
2013
- Wilken, S. (2013). Mixotrophs in aquatic ecosystems: linking physiology to food web dynamics.
2012
2010
- Aguirre von Wobeser, E. (2010). Genome-wide expression analysis of environmental stress in the cyanobacterium Synechocystis PCC 6803. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
- Beninca, E. (2010). Is there chaos ou there? Analysis of complex dynamics in plankton communities.
- van de Waal, D. B. (2010). Out of balance: implications of climate change for the ecological stoichiometry of harmful cyanobacteria. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
2009
2008
- Haverkamp, T. H. A. (2008). Shades of red and green : the colorful diversity and ecology of picocyanobacteria in the Baltic Sea. [Thesis, externally prepared, Universiteit van Amsterdam]. Netherlands Institute of Ecology (NIOO) - Royal Netherlands Academy of Arts and Sciences. [details]
- Stomp, M. (2008). Colourful coexistence : a new solution to the plankton paradox. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
2007
- Kardinaal, W. E. A. (2007). Who’s bad? : molecular identification reveals seasonal dynamics of toxic and non-toxic freshwater cyanobacteria. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
- Tonk, L. (2007). Impact of environmental factors on toxic and bioactive peptide production by harmful cyanobacteria. [Thesis, fully internal, Universiteit van Amsterdam]. [details]
2006
2024
- Bolhuis, H., Huisman, J., Brussaard, C. P. D., Artzy-Randrup, Y. A., Meyer, C., Jackson, V. E., Monier, A. & Harrison, K. (2024). Dataset Meyer et al. Rising temperature modulates dominance of a superinfecting virus in its unicellular Arctic algal host - FCM and qPCR, Supplement figures. NIOZ. https://doi.org/10.25850/nioz/7b.b.ch
2023
- Kornder, N. A., Müller, B., de Goeij, J., Vermeij, M., Huisman, J., Cappelletto, J., Zalm, M. J. L. & Martinez, S. (14-4-2023). Thesis_Niklas-Kornder_Supplementary-data_Chapter2. Universiteit van Amsterdam. https://doi.org/10.21942/uva.22592962.v1
- Kornder, N. A., de Goeij, J., Huisman, J., Vermeij, M., Müller, B., Esser, Y., Stoupin, D. & Leys, S. P. (12-4-2023). Thesis_Niklas-Kornder_Chapter3. Universiteit van Amsterdam. https://doi.org/10.21942/uva.22592956.v1
- Kornder, N., Huisman, J., de Goeij, J., Vermeij, M., Rombouts, A. J., Barnes, W. J. & Riley, A. T. K. (12-4-2023). Thesis_Niklas-Kornder_Chapter4. Universiteit van Amsterdam. https://doi.org/10.21942/uva.22592536.v2
- Kornder, N., Huisman, J., de Goeij, J. & Vermeij, M. (12-4-2023). Thesis_Niklas-Kornder_Chapter6. Universiteit van Amsterdam. https://doi.org/10.21942/uva.22592944.v1
- Kornder, N., Huisman, J., de Goeij, J., Vermeij, M., Esser, Y., de Nooijer, L. J. & Webb, A. E. (12-4-2023). Thesis_Niklas-Kornder_Chapter5. Universiteit van Amsterdam. https://doi.org/10.21942/uva.22592905.v1
2022
- Müller, B., Brocke, H., Rohwer, F., Dittmar, T., Huisman, J., Vermeij, M. & de Goeij, J. (2022). Nocturnal dissolved organic matter release by turf algae and its role in the microbialization of reefs. DRYAD. https://doi.org/10.5061/dryad.1ns1rn8ww
2021
- Biggs, T., Brussaard, C. & Huisman, J. (2021). Viral lysis modifies seasonal phytoplankton dynamics and carbon flow in the Southern Ocean. Data Portal of the Royal Netherlands Institute for Sea Research. https://doi.org/10.25850/nioz/7b.b.hc
- Roessingh, P., Alin, S. R., Huisman, J., Feely, R. A., Bednaršek, N., Renema, W., Mekkes, L. & Peijnenburg, K. T. C. A. (2021). Seawater carbonate chemistry and shell thickness, shell dissolution of Limacina helicina pteropods. PANGAEA. https://doi.org/10.1594/pangaea.930065
2018
- Slabbekoorn, H., Isojunno, S., Kok, A. C. M., DeRuiter, S. L., Huisman, J., Miller, P. J. O., Antunes, R. N., Visser, F., Pierce, G. J., Oudejans, M. G., Scott-Hayward, L. A. S. & Alves, A. C. (2018). Data from: Vocal foragers and silent crowds: context-dependent vocal variation in Northeast Atlantic long-finned pilot whales. DRYAD. https://doi.org/10.5061/dryad.6rj64
2017
- Chamberland, V., Latijnhouwers, K., Huisman, J., Hartmann, A. C. & Vermeij, M. J. A. (2017). Data set from Costs and benefits of maternally inherited algal symbionts in coral larvae. The Royal Society. https://doi.org/10.6084/m9.figshare.5100352.v1
2016
- Passarge, J., Hol, S., Escher, M. & Huisman, J. (2016). Appendix E. A figure illustrating the zero net growth isoclines of the species.. Wiley. https://doi.org/10.6084/m9.figshare.3565446.v1
- Passarge, J., Hol, S., Escher, M. & Huisman, J. (2016). Appendix D. A table with the initial conditions used in the model simulations of the monoculture and competition experiments.. Wiley. https://doi.org/10.6084/m9.figshare.3565449.v1
- Stomp, M., Huisman, J., Mittelbach, G. G., Litchman, E. & Klausmeier, C. A. (2016). Appendix B. Development of the structural equation model.. Wiley. https://doi.org/10.6084/m9.figshare.3552138.v1
- Stomp, M., Huisman, J., Mittelbach, G. G., Litchman, E. & Klausmeier, C. A. (2016). Supplement 1. Data on phytoplankton species richness and environmental variables used in this study.. Wiley. https://doi.org/10.6084/m9.figshare.3552135.v1
- Huisman, J. & Weissing, F. J. (2016). Appendix B. Stability of the coexistence equilibrium.. Wiley. https://doi.org/10.6084/m9.figshare.3522047.v1
- Stomp, M., Huisman, J., Mittelbach, G. G., Litchman, E. & Klausmeier, C. A. (2016). Appendix A. References describing EPA methods and their data.. Wiley. https://doi.org/10.6084/m9.figshare.3552141.v1
- Passarge, J., Hol, S., Escher, M. & Huisman, J. (2016). Appendix C. Figures illustrating the phosphorus uptake kinetics and the dynamics of intracellular phosphorus storage.. Wiley. https://doi.org/10.6084/m9.figshare.3565452.v1
- Passarge, J., Hol, S., Escher, M. & Huisman, J. (2016). Appendix B. A description of the mineral medium and inorganic carbon supply used in the experiments.. Wiley. https://doi.org/10.6084/m9.figshare.3565455.v1
- Huisman, J. & Weissing, F. J. (2016). Appendix A. Feasibility of the coexistence equilibrium.. Wiley. https://doi.org/10.6084/m9.figshare.3522050.v1
- Passarge, J., Hol, S., Escher, M. & Huisman, J. (2016). Appendix A. A detailed description of the competition model.. Wiley. https://doi.org/10.6084/m9.figshare.3565461.v1
- Verspagen, J. M. H., Passarge, J., Jöhnk, K. D., Visser, P. M., Peperzak, L., Boers, P., Laanbroek, H. J. & Huisman, J. (2016). Appendix A. An assessment of the nutrient status of Lake Volkerak.. Wiley. https://doi.org/10.6084/m9.figshare.3512321.v1
- Wilken, S., Verspagen, J. M. H., Naus-Wiezer, S., Huisman, J. & Van Donk, E. (2016). Appendix A. Detailed methods of additional experiments to explain the lack of biological control at high nitrogen loads.. Wiley. https://doi.org/10.6084/m9.figshare.3519638.v1
- Verspagen, J. M. H., Passarge, J., Jöhnk, K. D., Visser, P. M., Peperzak, L., Boers, P., Laanbroek, H. J. & Huisman, J. (2016). Appendix B. A table providing an overview of all model parameters and their estimated values.. Wiley. https://doi.org/10.6084/m9.figshare.3512318.v1
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Ancillary activities
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Royal Neth Inst for Sea Research (NIOZ)
international Scientific Advisory Committee (SAC)
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Royal Neth Inst for Sea Research (NIOZ)
Coe, A., Braakman, R., Biller, S. J., Arellano, A., Bliem, C., Vo, N. N., von Emster, K., Thomas, E., DeMers, M., Steglich, C., Huisman, J., & Chisholm, S. W. (2024). Emergence of metabolic coupling to the heterotroph Alteromonas promotes dark survival in Prochlorococcus. ISME Communications, 4(1), Article ycae131.